SPAST_CAEBR
ID SPAST_CAEBR Reviewed; 542 AA.
AC A8XV40;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Probable spastin homolog spas-1;
DE EC=5.6.1.1;
GN Name=spas-1; ORFNames=CBG19220;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Severs microtubules, probably in an ATP-dependent fashion.
CC {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=n ATP + n H2O + a microtubule = n ADP + n phosphate + (n+1)
CC alpha/beta tubulin heterodimers.; EC=5.6.1.1;
CC -!- SUBUNIT: Homohexamer. The homohexamer is stabilized by ATP-binding. The
CC homohexamer may adopt a ring conformation through which microtubules
CC pass prior to being severed. Interacts with microtubules (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton {ECO:0000250}. Cytoplasm,
CC perinuclear region {ECO:0000250}. Note=Localized to the perinuclear
CC region of the cytoplasm in early embryos. Present in the cytoskeletal
CC fraction. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the AAA ATPase family. Spastin subfamily.
CC {ECO:0000305}.
CC -!- CAUTION: Lacks the conserved MIT domain, which is one of the features
CC of the spastin family. {ECO:0000305}.
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DR EMBL; HE601047; CAP36507.2; -; Genomic_DNA.
DR AlphaFoldDB; A8XV40; -.
DR SMR; A8XV40; -.
DR STRING; 6238.CBG19220; -.
DR PRIDE; A8XV40; -.
DR WormBase; CBG19220a; CBP39759; WBGene00038478; Cbr-spas-1.
DR eggNOG; KOG0740; Eukaryota.
DR HOGENOM; CLU_000688_21_12_1; -.
DR InParanoid; A8XV40; -.
DR OMA; CSTYERV; -.
DR OrthoDB; 1176820at2759; -.
DR Proteomes; UP000008549; Chromosome V.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR GO; GO:0005874; C:microtubule; IEA:UniProtKB-KW.
DR GO; GO:0015630; C:microtubule cytoskeleton; IBA:GO_Central.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0016853; F:isomerase activity; IEA:UniProtKB-KW.
DR GO; GO:0008568; F:microtubule severing ATPase activity; IEA:UniProtKB-EC.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF17862; AAA_lid_3; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS00674; AAA; 1.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; Cytoplasm; Cytoskeleton; Isomerase; Microtubule;
KW Nucleotide-binding; Reference proteome.
FT CHAIN 1..542
FT /note="Probable spastin homolog spas-1"
FT /id="PRO_0000367131"
FT REGION 131..177
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 29..66
FT /evidence="ECO:0000255"
FT COMPBIAS 134..154
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 309..316
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 542 AA; 60735 MW; 38AD69F081E85355 CRC64;
MFAFSKAPAG CSTYERVTQK FQDGSNKLRA AIEMDELTKQ NGTINEKLQT AELYKQARQM
LKEANEFNIM DIPESKRSEV REKREKTLNL EKSAQDRLIK ICNEVDPNMK RASTAADPCR
AARITPRNTR ATVPGDKKVS KVKQTEKAPH VCSRGDRCGA HQPPPEKKST PLKPVNQIRT
RVKENKNPIG VQQQVFSFIL SCCMRRNCRR PHYLFPCMIS LKMNYFKFQA TLPNQLNTVN
RSNLLKGVDK AIGERLLDEI LDSTGVRMDD VAGCHSAKAT LEEAVILPAL NPNLFSGLRQ
PVKGILLFGP PGNGKTLLAK AVAGESKQMF FNISASSLTS KWVGDSEKTI RGLFQIARNG
QPSIIFIDEI DSILCERSEK DAEVSRRMKT EFLVQFDGAT SSPDDRILVI GATNRPYELD
DAVLRRFPKR IMLNLPDTEA RKELITNTLK KHDMMDGLSS SDIRYIASNT SGFSNSDLVA
LCKEAAMVPV REIHRSKLSV TDGDKIRKIR ASDFDTALRT IRPSTSDRIL SKLSDFSRNF
GC