SPF27_XENTR
ID SPF27_XENTR Reviewed; 223 AA.
AC Q6PBE2; Q28IS3;
DT 26-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Pre-mRNA-splicing factor SPF27;
DE AltName: Full=Protein BCAS2 homolog;
GN Name=bcas2; ORFNames=TNeu112e09.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Neurula;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for pre-mRNA splicing as component of the activated
CC spliceosome. May have a scaffolding role in the spliceosome assembly as
CC it contacts all other components of the core complex.
CC {ECO:0000250|UniProtKB:O75934}.
CC -!- SUBUNIT: Component of the pre-catalytic and catalytic spliceosome
CC complexes. Component of the postcatalytic spliceosome P complex.
CC {ECO:0000250|UniProtKB:O75934}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:O75934}.
CC -!- SIMILARITY: Belongs to the SPF27 family. {ECO:0000305}.
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DR EMBL; CR760253; CAJ83069.1; -; mRNA.
DR EMBL; BC059752; AAH59752.1; -; mRNA.
DR RefSeq; NP_988924.1; NM_203593.1.
DR AlphaFoldDB; Q6PBE2; -.
DR SMR; Q6PBE2; -.
DR STRING; 8364.ENSXETP00000060198; -.
DR DNASU; 394520; -.
DR GeneID; 394520; -.
DR KEGG; xtr:394520; -.
DR CTD; 10286; -.
DR Xenbase; XB-GENE-959514; bcas2.
DR eggNOG; KOG3096; Eukaryota.
DR InParanoid; Q6PBE2; -.
DR OrthoDB; 1607056at2759; -.
DR Reactome; R-XTR-72163; mRNA Splicing - Major Pathway.
DR Proteomes; UP000008143; Chromosome 6.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0000974; C:Prp19 complex; IBA:GO_Central.
DR GO; GO:0071007; C:U2-type catalytic step 2 spliceosome; ISS:UniProtKB.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; ISS:UniProtKB.
DR InterPro; IPR008409; SPF27.
DR PANTHER; PTHR13296; PTHR13296; 1.
DR Pfam; PF05700; BCAS2; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Spliceosome.
FT CHAIN 1..223
FT /note="Pre-mRNA-splicing factor SPF27"
FT /id="PRO_0000064864"
FT COILED 139..223
FT /evidence="ECO:0000255"
SQ SEQUENCE 223 AA; 25931 MW; C22A4CC4439D1AFC CRC64;
MAGTSLVAGD VVVDALPYFD QGYDAQGVRE AAAALVEEET RRYRPTKNYL SYLPTPDYSA
FETEIMRNEF ERLSSRQPLE LLSMKRYELP APLSGQRNDI TAWQECVNNS MAQLEHQAVR
IENLELMSQH GCNAWKVYNE NLLHMIDCAQ KDLQKLRKKI QDLNWQRKNS QLTAGARLRE
MESTWVSLVS KNYEIERAIV QMENEVYQLK ERSGENKENI EDY