SPF30_PONAB
ID SPF30_PONAB Reviewed; 238 AA.
AC Q5R591;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 25-MAY-2022, entry version 76.
DE RecName: Full=Survival of motor neuron-related-splicing factor 30;
DE AltName: Full=Survival motor neuron domain-containing protein 1;
GN Name=SMNDC1; Synonyms=SPF30;
OS Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pongo.
OX NCBI_TaxID=9601;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain cortex;
RG The German cDNA consortium;
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in spliceosome assembly (By similarity).
CC {ECO:0000250|UniProtKB:O75940}.
CC -!- SUBUNIT: Associates with spliceosomes. Associates with U4/U5/U6 tri-
CC snRNP and with U2 snRNP (By similarity).
CC {ECO:0000250|UniProtKB:O75940}.
CC -!- SUBCELLULAR LOCATION: Nucleus speckle {ECO:0000250|UniProtKB:O75940}.
CC Nucleus, Cajal body {ECO:0000250|UniProtKB:O75940}. Note=Detected in
CC nuclear speckles containing snRNP and in Cajal (coiled) bodies.
CC {ECO:0000250|UniProtKB:O75940}.
CC -!- DOMAIN: The Tudor domain mediates association with dimethylarginines,
CC which are common in snRNP proteins. {ECO:0000250|UniProtKB:O75940}.
CC -!- SIMILARITY: Belongs to the SMN family. {ECO:0000305}.
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DR EMBL; CR860973; CAH93075.1; -; mRNA.
DR RefSeq; NP_001126821.1; NM_001133349.1.
DR AlphaFoldDB; Q5R591; -.
DR BMRB; Q5R591; -.
DR SMR; Q5R591; -.
DR STRING; 9601.ENSPPYP00000003078; -.
DR Ensembl; ENSPPYT00000003182; ENSPPYP00000003078; ENSPPYG00000002643.
DR GeneID; 100173826; -.
DR KEGG; pon:100173826; -.
DR CTD; 10285; -.
DR eggNOG; KOG3026; Eukaryota.
DR GeneTree; ENSGT00940000153352; -.
DR HOGENOM; CLU_069491_3_0_1; -.
DR InParanoid; Q5R591; -.
DR OMA; CMAVWSQ; -.
DR OrthoDB; 1459016at2759; -.
DR TreeFam; TF315413; -.
DR Proteomes; UP000001595; Chromosome 10.
DR GO; GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd04508; TUDOR; 1.
DR InterPro; IPR010304; SMN_Tudor.
DR InterPro; IPR002999; Tudor.
DR Pfam; PF06003; SMN; 1.
DR SMART; SM00333; TUDOR; 1.
DR PROSITE; PS50304; TUDOR; 1.
PE 2: Evidence at transcript level;
KW Acetylation; Apoptosis; mRNA processing; mRNA splicing; Nucleus;
KW Phosphoprotein; Reference proteome; Spliceosome.
FT CHAIN 1..238
FT /note="Survival of motor neuron-related-splicing factor 30"
FT /id="PRO_0000347223"
FT DOMAIN 72..132
FT /note="Tudor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00211"
FT MOTIF 142..160
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255"
FT MOD_RES 201
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:O75940"
FT MOD_RES 219
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250|UniProtKB:O75940"
SQ SEQUENCE 238 AA; 26725 MW; F4F09692E2083F5B CRC64;
MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLAS
SDSFASTQPT HSWKVGDKCM AIWSEDGQCY EAEIEEIDEE NGTAAITFAG YGNAEVTPLL
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELEQE REDQKVKWQQ
FNNRAYSKNK KGQVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ