SPH13_ARATH
ID SPH13_ARATH Reviewed; 160 AA.
AC Q5XV33; Q9XH01;
DT 12-APR-2017, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=S-protein homolog 13 {ECO:0000303|PubMed:10344198};
DE Flags: Precursor;
GN Name=SPH13 {ECO:0000303|PubMed:10344198};
GN OrderedLocusNames=At5g26050 {ECO:0000312|Araport:AT5G26050};
GN ORFNames=T1N24.10 {ECO:0000312|EMBL:AAD40130.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=12481096; DOI=10.1104/pp.010207;
RA Xiao Y.-L., Malik M., Whitelaw C.A., Town C.D.;
RT "Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2
RT of Arabidopsis.";
RL Plant Physiol. 130:2118-2128(2002).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=10344198; DOI=10.1023/a:1006178511787;
RA Ride J.P., Davies E.M., Franklin F.C.H., Marshall D.F.;
RT "Analysis of Arabidopsis genome sequence reveals a large new gene family in
RT plants.";
RL Plant Mol. Biol. 39:927-932(1999).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305|PubMed:10344198}.
CC -!- SIMILARITY: Belongs to the plant self-incompatibility (S1) protein
CC family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD40130.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF149413; AAD40130.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED93518.1; -; Genomic_DNA.
DR EMBL; AY954868; AAX55194.1; -; Genomic_DNA.
DR EMBL; AY735689; AAU44559.1; -; mRNA.
DR RefSeq; NP_197977.1; NM_122506.2.
DR AlphaFoldDB; Q5XV33; -.
DR STRING; 3702.AT5G26050.1; -.
DR PaxDb; Q5XV33; -.
DR PRIDE; Q5XV33; -.
DR EnsemblPlants; AT5G26050.1; AT5G26050.1; AT5G26050.
DR GeneID; 832674; -.
DR Gramene; AT5G26050.1; AT5G26050.1; AT5G26050.
DR KEGG; ath:AT5G26050; -.
DR Araport; AT5G26050; -.
DR TAIR; locus:2180667; AT5G26050.
DR eggNOG; ENOG502R1HC; Eukaryota.
DR HOGENOM; CLU_1654536_0_0_1; -.
DR InParanoid; Q5XV33; -.
DR OMA; YQRRIVR; -.
DR OrthoDB; 1339868at2759; -.
DR PhylomeDB; Q5XV33; -.
DR PRO; PR:Q5XV33; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q5XV33; baseline.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0060320; P:rejection of self pollen; IEA:UniProtKB-KW.
DR InterPro; IPR010264; Self-incomp_S1.
DR PANTHER; PTHR31232; PTHR31232; 1.
DR Pfam; PF05938; Self-incomp_S1; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Secreted; Self-incompatibility; Signal.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..160
FT /note="S-protein homolog 13"
FT /id="PRO_5009344327"
SQ SEQUENCE 160 AA; 18399 MW; 05CD6EF5EA9EBD6C CRC64;
MGRDLGWCFF VATVLLAAVL LPAPTIAGRL ELKNEISGVA SVRKAKLAVR CWSNEDDLGW
NMLKPKQSRI WKFTTMNMWP FQKTEFRCQF RSGFGTTNED VVTVFSVKDG FRKQCGVGGD
ECFWVAKRDG FYLRRIVKDG GGDSRKKYVD VLKSKWVWKW
