SPH27_ARATH
ID SPH27_ARATH Reviewed; 151 AA.
AC Q9FI84;
DT 12-APR-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=S-protein homolog 27 {ECO:0000303|PubMed:10344198};
DE Flags: Precursor;
GN Name=SPH27 {ECO:0000303|PubMed:10344198};
GN OrderedLocusNames=At5g06020 {ECO:0000312|Araport:AT5G06020};
GN ORFNames=K18J17.22 {ECO:0000312|EMBL:BAB10807.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10470850; DOI=10.1093/dnares/6.3.183;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Kotani H.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IX. Sequence
RT features of the regions of 1,011,550 bp covered by seventeen P1 and TAC
RT clones.";
RL DNA Res. 6:183-195(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=10344198; DOI=10.1023/a:1006178511787;
RA Ride J.P., Davies E.M., Franklin F.C.H., Marshall D.F.;
RT "Analysis of Arabidopsis genome sequence reveals a large new gene family in
RT plants.";
RL Plant Mol. Biol. 39:927-932(1999).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305|PubMed:10344198}.
CC -!- SIMILARITY: Belongs to the plant self-incompatibility (S1) protein
CC family. {ECO:0000305}.
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DR EMBL; AB017060; BAB10807.1; -; Genomic_DNA.
DR EMBL; CP002688; AED90955.1; -; Genomic_DNA.
DR EMBL; DQ056671; AAY78817.1; -; mRNA.
DR RefSeq; NP_196221.1; NM_120684.1.
DR AlphaFoldDB; Q9FI84; -.
DR SMR; Q9FI84; -.
DR STRING; 3702.AT5G06020.1; -.
DR PaxDb; Q9FI84; -.
DR PRIDE; Q9FI84; -.
DR EnsemblPlants; AT5G06020.1; AT5G06020.1; AT5G06020.
DR GeneID; 830489; -.
DR Gramene; AT5G06020.1; AT5G06020.1; AT5G06020.
DR KEGG; ath:AT5G06020; -.
DR Araport; AT5G06020; -.
DR TAIR; locus:2153679; AT5G06020.
DR HOGENOM; CLU_125658_0_1_1; -.
DR InParanoid; Q9FI84; -.
DR OMA; CGFSQGQ; -.
DR OrthoDB; 1567248at2759; -.
DR PhylomeDB; Q9FI84; -.
DR PRO; PR:Q9FI84; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FI84; baseline and differential.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0060320; P:rejection of self pollen; IEA:UniProtKB-KW.
DR InterPro; IPR010264; Self-incomp_S1.
DR PANTHER; PTHR31232; PTHR31232; 1.
DR Pfam; PF05938; Self-incomp_S1; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Reference proteome; Secreted; Self-incompatibility; Signal.
FT SIGNAL 1..?
FT /evidence="ECO:0000255"
FT CHAIN ?..151
FT /note="S-protein homolog 27"
FT /id="PRO_0000439574"
FT CARBOHYD 91
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 123
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 151 AA; 17750 MW; 58E21853BE0B1582 CRC64;
MINSSSKKNL ISTFSSMFTI CIVMIFVTCY ETFQQDGEPF PIRGPLTRIT VKNNNDYLLG
IHCKSKDDDL GFHIHKEGEL YGWKFHVNFQ NSTLYFCGFS QGQDNKGVFD IDRAERDFYR
CRNCTWNAKK DSLYGYSNLP QTVTWFFKWL K