SPH4_ARATH
ID SPH4_ARATH Reviewed; 152 AA.
AC F4JZG1; Q9FMQ3;
DT 12-APR-2017, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 03-AUG-2022, entry version 54.
DE RecName: Full=S-protein homolog 4 {ECO:0000303|PubMed:10344198};
DE Flags: Precursor;
GN Name=SPH4 {ECO:0000303|PubMed:10344198};
GN OrderedLocusNames=At5g12070 {ECO:0000312|Araport:AT5G12070};
GN ORFNames=F14F18 {ECO:0000305};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=10344198; DOI=10.1023/a:1006178511787;
RA Ride J.P., Davies E.M., Franklin F.C.H., Marshall D.F.;
RT "Analysis of Arabidopsis genome sequence reveals a large new gene family in
RT plants.";
RL Plant Mol. Biol. 39:927-932(1999).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305|PubMed:10344198}.
CC -!- SIMILARITY: Belongs to the plant self-incompatibility (S1) protein
CC family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10025.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB007727; BAB10025.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED91758.1; -; Genomic_DNA.
DR RefSeq; NP_196768.2; NM_121245.2.
DR AlphaFoldDB; F4JZG1; -.
DR SMR; F4JZG1; -.
DR STRING; 3702.AT5G12070.1; -.
DR PaxDb; F4JZG1; -.
DR PRIDE; F4JZG1; -.
DR ProteomicsDB; 232573; -.
DR EnsemblPlants; AT5G12070.1; AT5G12070.1; AT5G12070.
DR GeneID; 831080; -.
DR Gramene; AT5G12070.1; AT5G12070.1; AT5G12070.
DR KEGG; ath:AT5G12070; -.
DR Araport; AT5G12070; -.
DR TAIR; locus:2176987; AT5G12070.
DR eggNOG; ENOG502S7CQ; Eukaryota.
DR HOGENOM; CLU_125658_0_1_1; -.
DR InParanoid; F4JZG1; -.
DR OMA; DAFNICY; -.
DR OrthoDB; 1384229at2759; -.
DR PRO; PR:F4JZG1; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; F4JZG1; differential.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0060320; P:rejection of self pollen; IEA:UniProtKB-KW.
DR InterPro; IPR010264; Self-incomp_S1.
DR PANTHER; PTHR31232; PTHR31232; 1.
DR Pfam; PF05938; Self-incomp_S1; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Reference proteome; Secreted; Self-incompatibility; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..152
FT /note="S-protein homolog 4"
FT /id="PRO_5003316572"
FT CARBOHYD 71
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 152 AA; 17321 MW; 610FB30CD4658C6A CRC64;
MTTMLKTQVH VVVIYLLIQI AFSQVKPGSD LKWSTLKSVV TITNRLGDGS TLKLHCKSAD
DDLGLKILAP NGSWSFKFRP SIVPGVTLFF CHFTWPGQSK WFNIYDDDRD GVRMGIPCIY
CIWDIGKYGP CRFSEIDDAF NICYDWNGNR RS