SPH5_ARATH
ID SPH5_ARATH Reviewed; 128 AA.
AC O23020; A0ME54; Q8LD41;
DT 12-APR-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=S-protein homolog 5 {ECO:0000303|PubMed:10344198};
DE Flags: Precursor;
GN Name=SPH5 {ECO:0000303|PubMed:10344198};
GN OrderedLocusNames=At1g04645 {ECO:0000312|Araport:AT1G04645};
GN ORFNames=T1G11.10 {ECO:0000312|EMBL:AAB80626.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=10344198; DOI=10.1023/a:1006178511787;
RA Ride J.P., Davies E.M., Franklin F.C.H., Marshall D.F.;
RT "Analysis of Arabidopsis genome sequence reveals a large new gene family in
RT plants.";
RL Plant Mol. Biol. 39:927-932(1999).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305|PubMed:10344198}.
CC -!- SIMILARITY: Belongs to the plant self-incompatibility (S1) protein
CC family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABK28382.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC002376; AAB80626.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE27728.1; -; Genomic_DNA.
DR EMBL; DQ446227; ABE65598.1; -; mRNA.
DR EMBL; DQ652822; ABK28382.1; ALT_TERM; mRNA.
DR EMBL; BT026094; ABG48450.1; -; mRNA.
DR EMBL; AY086222; AAM64299.1; -; mRNA.
DR PIR; C86179; C86179.
DR RefSeq; NP_563713.1; NM_100344.1.
DR AlphaFoldDB; O23020; -.
DR SMR; O23020; -.
DR PaxDb; O23020; -.
DR PRIDE; O23020; -.
DR ProteomicsDB; 245192; -.
DR EnsemblPlants; AT1G04645.1; AT1G04645.1; AT1G04645.
DR GeneID; 839459; -.
DR Gramene; AT1G04645.1; AT1G04645.1; AT1G04645.
DR KEGG; ath:AT1G04645; -.
DR Araport; AT1G04645; -.
DR TAIR; locus:505006099; AT1G04645.
DR eggNOG; ENOG502S7CQ; Eukaryota.
DR HOGENOM; CLU_125658_0_1_1; -.
DR InParanoid; O23020; -.
DR OMA; PLTIHCK; -.
DR OrthoDB; 1384229at2759; -.
DR PhylomeDB; O23020; -.
DR PRO; PR:O23020; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; O23020; baseline and differential.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0060320; P:rejection of self pollen; IEA:UniProtKB-KW.
DR InterPro; IPR010264; Self-incomp_S1.
DR PANTHER; PTHR31232; PTHR31232; 1.
DR Pfam; PF05938; Self-incomp_S1; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Secreted; Self-incompatibility; Signal.
FT SIGNAL 1..20
FT /evidence="ECO:0000255"
FT CHAIN 21..128
FT /note="S-protein homolog 5"
FT /id="PRO_5009340812"
FT CONFLICT 77
FT /note="L -> F (in Ref. 5; AAM64299)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 128 AA; 14903 MW; D8A85DDE46B65BDE CRC64;
MEKVSIVCFF FFLLFGSGYG GLPPFWRATV VTMTNLIGGP PLTIHCKSKQ DDLGIHVVPF
KQEYHFKFQP NLWKSTLFFC SFQWDSQFKS FDIYDAQRDQ GICDDCQWEI KPDGPCRLGK
KAKCFPWK
