SPH6_ARATH
ID SPH6_ARATH Reviewed; 136 AA.
AC F2Q9V4;
DT 12-APR-2017, integrated into UniProtKB/Swiss-Prot.
DT 12-APR-2017, sequence version 2.
DT 03-AUG-2022, entry version 32.
DE RecName: Full=S-protein homolog 6 {ECO:0000303|PubMed:10344198};
DE Flags: Precursor;
GN Name=SPH6 {ECO:0000303|PubMed:10344198};
GN OrderedLocusNames=At5g05825 {ECO:0000305}; ORFNames=MJJ3 {ECO:0000305};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Wheeler M.J., Bell E.M., Holub E.B., Ride J., Franklin-Tong V.E.,
RA Franklin F.H.;
RT "SPH: a novel family of secreted proteins with members implicated in plant
RT defense regulation and development.";
RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT features of the 1.6 Mb regions covered by twenty physically assigned P1
RT clones.";
RL DNA Res. 4:215-230(1997).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=10344198; DOI=10.1023/a:1006178511787;
RA Ride J.P., Davies E.M., Franklin F.C.H., Marshall D.F.;
RT "Analysis of Arabidopsis genome sequence reveals a large new gene family in
RT plants.";
RL Plant Mol. Biol. 39:927-932(1999).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305|PubMed:10344198}.
CC -!- SIMILARITY: Belongs to the plant self-incompatibility (S1) protein
CC family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CBL42999.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; FN691474; CBL42999.1; ALT_INIT; Genomic_DNA.
DR EMBL; AB005237; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; F2Q9V4; -.
DR SMR; F2Q9V4; -.
DR PeptideAtlas; F2Q9V4; -.
DR PRIDE; F2Q9V4; -.
DR Araport; AT5G05825; -.
DR PRO; PR:F2Q9V4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; F2Q9V4; baseline and differential.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0060320; P:rejection of self pollen; IEA:UniProtKB-KW.
DR InterPro; IPR010264; Self-incomp_S1.
DR PANTHER; PTHR31232; PTHR31232; 1.
DR Pfam; PF05938; Self-incomp_S1; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Reference proteome; Secreted; Self-incompatibility; Signal.
FT SIGNAL 1..17
FT /evidence="ECO:0000255"
FT CHAIN 18..136
FT /note="S-protein homolog 6"
FT /id="PRO_0000439571"
FT CARBOHYD 76
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 108
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 136 AA; 15887 MW; C05FE3B8B84586AB CRC64;
MFIIIFIVLI SLIGCETLQH DGKVFPMKGP LTRVVIYNDN DYLLGVHCKS RDDDHGFHIL
QKGGLYGWMF YVNFMNSTLY FCGFSQEQVK KGVFDIYKAV RDSSRCRNCT WEAKEDGIYG
YGEIPKKNPL FYKWLM