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SPHK1_HUMAN
ID   SPHK1_HUMAN             Reviewed;         384 AA.
AC   Q9NYA1; Q8N632; Q96GK1; Q9HD92; Q9NY70; Q9NYL3;
DT   24-OCT-2001, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 185.
DE   RecName: Full=Sphingosine kinase 1 {ECO:0000305};
DE            Short=SK 1 {ECO:0000303|PubMed:23935096};
DE            Short=SPK 1;
DE            EC=2.7.1.91 {ECO:0000269|PubMed:10802064, ECO:0000269|PubMed:20577214, ECO:0000269|PubMed:23602659, ECO:0000269|PubMed:24929359};
DE   AltName: Full=Acetyltransferase SPHK1;
DE            EC=2.3.1.-;
GN   Name=SPHK1 {ECO:0000312|HGNC:HGNC:11240};
GN   Synonyms=SK1 {ECO:0000303|PubMed:23935096}, SPHK, SPK;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
RX   PubMed=10863092; DOI=10.1016/s0378-1119(00)00205-5;
RA   Melendez A.J., Carlos-Dias E., Gosink M., Allen J.M., Takacs L.;
RT   "Human sphingosine kinase: molecular cloning, functional characterization
RT   and tissue distribution.";
RL   Gene 251:19-26(2000).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), CATALYTIC ACTIVITY, SUBSTRATE
RP   SPECIFICITY, AND TISSUE SPECIFICITY.
RX   PubMed=10802064; DOI=10.1016/s0014-5793(00)01510-6;
RA   Nava V.E., Lacana' E., Poulton S., Liu H., Sugiura M., Kono K.,
RA   Milstien S., Kohama T., Spiegel S.;
RT   "Functional characterization of human sphingosine kinase-1.";
RL   FEBS Lett. 473:81-84(2000).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), SUBSTRATE SPECIFICITY,
RP   BIOPHYSICOCHEMICAL PROPERTIES, AND COFACTOR.
RX   PubMed=10947957; DOI=10.1042/bj3500429;
RA   Pitson S.M., D'Andrea R.J., Vandeleur L., Moretti P.A.B., Xia P.,
RA   Gamble J.R., Vadas M.A., Wattenberg B.W.;
RT   "Human sphingosine kinase: purification, molecular cloning and
RT   characterization of the native and recombinant enzymes.";
RL   Biochem. J. 350:429-441(2000).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
RA   Van Veldhoven P.P., Gijsbers S.;
RL   Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC   TISSUE=Mammary gland, Ovary, and Testis;
RX   PubMed=14702039; DOI=10.1038/ng1285;
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA   Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA   Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA   Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA   Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA   Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA   Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA   Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA   Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA   Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA   Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA   Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA   Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA   Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA   Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA   Isogai T., Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs.";
RL   Nat. Genet. 36:40-45(2004).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=16625196; DOI=10.1038/nature04689;
RA   Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R.,
RA   Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A.,
RA   Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J.,
RA   Chang J.L., Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J.,
RA   DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S.,
RA   Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E.,
RA   Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K.,
RA   LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J.,
RA   Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A.,
RA   Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K.,
RA   Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D.,
RA   Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A.,
RA   Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.;
RT   "DNA sequence of human chromosome 17 and analysis of rearrangement in the
RT   human lineage.";
RL   Nature 440:1045-1049(2006).
RN   [7]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA   Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA   Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA   Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA   Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA   Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA   Hunkapiller M.W., Myers E.W., Venter J.C.;
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [8]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2 AND 3).
RC   TISSUE=Blood, Kidney, and Skin;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [9]
RP   FUNCTION, CATALYTIC ACTIVITY, SUBSTRATE SPECIFICITY, AND BIOPHYSICOCHEMICAL
RP   PROPERTIES.
RX   PubMed=11923095; DOI=10.1016/s1388-1981(01)00166-4;
RA   Gijsbers S., Asselberghs S., Herdewijn P., Van Veldhoven P.P.;
RT   "1-O-Hexadecyl-2-desoxy-2-amino-sn-glycerol, a substrate for human
RT   sphingosine kinase.";
RL   Biochim. Biophys. Acta 1580:1-8(2002).
RN   [10]
RP   INTERACTION WITH SPHKAP.
RX   PubMed=12080051; DOI=10.1074/jbc.m202841200;
RA   Lacana E., Maceyka M., Milstien S., Spiegel S.;
RT   "Cloning and characterization of a protein kinase A anchoring protein
RT   (AKAP)-related protein that interacts with and regulates sphingosine kinase
RT   1 activity.";
RL   J. Biol. Chem. 277:32947-32953(2002).
RN   [11]
RP   SUBCELLULAR LOCATION, AND NUCLEAR EXPORT SIGNALS.
RX   PubMed=14575709; DOI=10.1016/j.bbrc.2003.09.194;
RA   Inagaki Y., Li P.Y., Wada A., Mitsutake S., Igarashi Y.;
RT   "Identification of functional nuclear export sequences in human sphingosine
RT   kinase 1.";
RL   Biochem. Biophys. Res. Commun. 311:168-173(2003).
RN   [12]
RP   FUNCTION.
RX   PubMed=16118219; DOI=10.1074/jbc.m502207200;
RA   Maceyka M., Sankala H., Hait N.C., Le Stunff H., Liu H., Toman R.,
RA   Collier C., Zhang M., Satin L.S., Merrill A.H. Jr., Milstien S.,
RA   Spiegel S.;
RT   "SphK1 and SphK2, sphingosine kinase isoenzymes with opposing functions in
RT   sphingolipid metabolism.";
RL   J. Biol. Chem. 280:37118-37129(2005).
RN   [13]
RP   INTERACTION WITH EEF1A1, AND BIOPHYSICOCHEMICAL PROPERTIES.
RX   PubMed=18263879; DOI=10.1074/jbc.m708782200;
RA   Leclercq T.M., Moretti P.A., Vadas M.A., Pitson S.M.;
RT   "Eukaryotic elongation factor 1A interacts with sphingosine kinase and
RT   directly enhances its catalytic activity.";
RL   J. Biol. Chem. 283:9606-9614(2008).
RN   [14]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-193, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=18669648; DOI=10.1073/pnas.0805139105;
RA   Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,
RA   Elledge S.J., Gygi S.P.;
RT   "A quantitative atlas of mitotic phosphorylation.";
RL   Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
RN   [15]
RP   INTERACTION WITH CIB1, SUBCELLULAR LOCATION, AND MUTAGENESIS OF
RP   197-PHE-LEU-198.
RX   PubMed=19854831; DOI=10.1074/jbc.m109.068395;
RA   Jarman K.E., Moretti P.A., Zebol J.R., Pitson S.M.;
RT   "Translocation of sphingosine kinase 1 to the plasma membrane is mediated
RT   by calcium- and integrin-binding protein 1.";
RL   J. Biol. Chem. 285:483-492(2010).
RN   [16]
RP   CATALYTIC ACTIVITY, FUNCTION, INTERACTION WITH TRAF2, MUTAGENESIS OF
RP   GLY-82, AND PHOSPHORYLATION AT SER-225.
RX   PubMed=20577214; DOI=10.1038/nature09128;
RA   Alvarez S.E., Harikumar K.B., Hait N.C., Allegood J., Strub G.M., Kim E.Y.,
RA   Maceyka M., Jiang H., Luo C., Kordula T., Milstien S., Spiegel S.;
RT   "Sphingosine-1-phosphate is a missing cofactor for the E3 ubiquitin ligase
RT   TRAF2.";
RL   Nature 465:1084-1088(2010).
RN   [17]
RP   FUNCTION.
RX   PubMed=23935096; DOI=10.1074/jbc.m113.489443;
RA   Adada M.M., Orr-Gandy K.A., Snider A.J., Canals D., Hannun Y.A.,
RA   Obeid L.M., Clarke C.J.;
RT   "Sphingosine kinase 1 regulates tumor necrosis factor-mediated RANTES
RT   induction through p38 mitogen-activated protein kinase but independently of
RT   nuclear factor kappaB activation.";
RL   J. Biol. Chem. 288:27667-27679(2013).
RN   [18]
RP   FUNCTION, SUBCELLULAR LOCATION, CATALYTIC ACTIVITY, AND MUTAGENESIS OF
RP   LEU-194 AND 197-PHE-LEU-198.
RX   PubMed=24929359; DOI=10.1038/ncb2987;
RA   Shen H., Giordano F., Wu Y., Chan J., Zhu C., Milosevic I., Wu X., Yao K.,
RA   Chen B., Baumgart T., Sieburth D., De Camilli P.;
RT   "Coupling between endocytosis and sphingosine kinase 1 recruitment.";
RL   Nat. Cell Biol. 16:652-662(2014).
RN   [19]
RP   FUNCTION, ACTIVITY REGULATION, AND CATALYTIC ACTIVITY.
RX   PubMed=25417698; DOI=10.1038/ncomms6514;
RA   Lee H., Lee J.K., Park M.H., Hong Y.R., Marti H.H., Kim H., Okada Y.,
RA   Otsu M., Seo E.J., Park J.H., Bae J.H., Okino N., He X., Schuchman E.H.,
RA   Bae J.S., Jin H.K.;
RT   "Pathological roles of the VEGF/SphK pathway in Niemann-Pick type C
RT   neurons.";
RL   Nat. Commun. 5:5514-5514(2014).
RN   [20]
RP   FUNCTION.
RX   PubMed=28049734; DOI=10.1074/jbc.m116.762377;
RA   Lima S., Milstien S., Spiegel S.;
RT   "Sphingosine and Sphingosine Kinase 1 Involvement in Endocytic Membrane
RT   Trafficking.";
RL   J. Biol. Chem. 292:3074-3088(2017).
RN   [21]
RP   TISSUE SPECIFICITY, SUBCELLULAR LOCATION, AND FUNCTION.
RX   PubMed=29662056; DOI=10.1038/s41467-018-03674-2;
RA   Lee J.Y., Han S.H., Park M.H., Baek B., Song I.S., Choi M.K., Takuwa Y.,
RA   Ryu H., Kim S.H., He X., Schuchman E.H., Bae J.S., Jin H.K.;
RT   "Neuronal SphK1 acetylates COX2 and contributes to pathogenesis in a model
RT   of Alzheimer's Disease.";
RL   Nat. Commun. 9:1479-1479(2018).
RN   [22]
RP   X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) OF 9-364 IN COMPLEXES WITH SUBSTRATE
RP   ANALOGS AND ADP, CATALYTIC ACTIVITY, FUNCTION, ACTIVE SITE, MUTAGENESIS OF
RP   ASP-81, AND SUBSTRATE-BINDING REGION.
RX   PubMed=23602659; DOI=10.1016/j.str.2013.02.025;
RA   Wang Z., Min X., Xiao S.H., Johnstone S., Romanow W., Meininger D., Xu H.,
RA   Liu J., Dai J., An S., Thibault S., Walker N.;
RT   "Molecular basis of sphingosine kinase 1 substrate recognition and
RT   catalysis.";
RL   Structure 21:798-809(2013).
CC   -!- FUNCTION: Catalyzes the phosphorylation of sphingosine to form
CC       sphingosine 1-phosphate (SPP), a lipid mediator with both intra- and
CC       extracellular functions. Also acts on D-erythro-sphingosine and to a
CC       lesser extent sphinganine, but not other lipids, such as D,L-threo-
CC       dihydrosphingosine, N,N-dimethylsphingosine, diacylglycerol, ceramide,
CC       or phosphatidylinositol (PubMed:20577214, PubMed:23602659,
CC       PubMed:29662056, PubMed:24929359, PubMed:11923095). In contrast to
CC       proapoptotic SPHK2, has a negative effect on intracellular ceramide
CC       levels, enhances cell growth and inhibits apoptosis (PubMed:16118219).
CC       Involved in the regulation of inflammatory response and
CC       neuroinflammation. Via the product sphingosine 1-phosphate, stimulates
CC       TRAF2 E3 ubiquitin ligase activity, and promotes activation of NF-
CC       kappa-B in response to TNF signaling leading to IL17 secretion
CC       (PubMed:20577214). In response to TNF and in parallel to NF-kappa-B
CC       activation, negatively regulates RANTES induction through p38 MAPK
CC       signaling pathway (PubMed:23935096). Involved in endocytic membrane
CC       trafficking induced by sphingosine, recruited to dilate endosomes, also
CC       plays a role on later stages of endosomal maturation and membrane
CC       fusion independently of its kinase activity (PubMed:28049734,
CC       PubMed:24929359). In Purkinje cells, seems to be also involved in the
CC       regulation of autophagosome-lysosome fusion upon VEGFA
CC       (PubMed:25417698). {ECO:0000269|PubMed:11923095,
CC       ECO:0000269|PubMed:16118219, ECO:0000269|PubMed:20577214,
CC       ECO:0000269|PubMed:23602659, ECO:0000269|PubMed:23935096,
CC       ECO:0000269|PubMed:24929359, ECO:0000269|PubMed:25417698,
CC       ECO:0000269|PubMed:28049734, ECO:0000269|PubMed:29662056}.
CC   -!- FUNCTION: Has serine acetyltransferase activity on PTGS2/COX2 in an
CC       acetyl-CoA dependent manner. The acetyltransferase activity increases
CC       in presence of the kinase substrate, sphingosine. During
CC       neuroinflammation, through PTGS2 acetylation, promotes neuronal
CC       secretion of specialized preresolving mediators (SPMs), especially 15-
CC       R-lipoxin A4, which results in an increase of phagocytic microglia.
CC       {ECO:0000250|UniProtKB:Q8CI15}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a sphingoid base + ATP = a sphingoid 1-phosphate + ADP + H(+);
CC         Xref=Rhea:RHEA:51496, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:76941, ChEBI:CHEBI:84410, ChEBI:CHEBI:456216;
CC         EC=2.7.1.91; Evidence={ECO:0000269|PubMed:10802064,
CC         ECO:0000269|PubMed:20577214, ECO:0000269|PubMed:23602659,
CC         ECO:0000269|PubMed:24929359, ECO:0000269|PubMed:25417698};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:51497;
CC         Evidence={ECO:0000269|PubMed:24929359, ECO:0000269|PubMed:25417698};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=acetyl-CoA + L-seryl-[protein] = CoA + O-acetyl-L-seryl-
CC         [protein]; Xref=Rhea:RHEA:59392, Rhea:RHEA-COMP:9863, Rhea:RHEA-
CC         COMP:15352, ChEBI:CHEBI:29999, ChEBI:CHEBI:57287, ChEBI:CHEBI:57288,
CC         ChEBI:CHEBI:141128; Evidence={ECO:0000250|UniProtKB:Q8CI15};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:59393;
CC         Evidence={ECO:0000250|UniProtKB:Q8CI15};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + sphinganine = ADP + H(+) + sphinganine 1-phosphate;
CC         Xref=Rhea:RHEA:15465, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:57817, ChEBI:CHEBI:57939, ChEBI:CHEBI:456216;
CC         EC=2.7.1.91; Evidence={ECO:0000269|PubMed:10802064,
CC         ECO:0000269|PubMed:11923095};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:15466;
CC         Evidence={ECO:0000269|PubMed:10802064, ECO:0000269|PubMed:11923095};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + sphing-4-enine = ADP + H(+) + sphing-4-enine 1-
CC         phosphate; Xref=Rhea:RHEA:35847, ChEBI:CHEBI:15378,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:57756, ChEBI:CHEBI:60119,
CC         ChEBI:CHEBI:456216; EC=2.7.1.91;
CC         Evidence={ECO:0000269|PubMed:10802064, ECO:0000269|PubMed:11923095};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:35848;
CC         Evidence={ECO:0000269|PubMed:10802064, ECO:0000269|PubMed:11923095};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=1-O-hexadecyl-2-amino-sn-glycerol + ATP = 1-O-hexadecyl-2-
CC         desoxy-2-amino-sn-glycero-3-phosphate + ADP + H(+);
CC         Xref=Rhea:RHEA:41163, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:77786, ChEBI:CHEBI:77787, ChEBI:CHEBI:456216;
CC         Evidence={ECO:0000269|PubMed:11923095};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:41164;
CC         Evidence={ECO:0000269|PubMed:11923095};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000269|PubMed:10947957};
CC   -!- ACTIVITY REGULATION: Acetyltransferase activity increases in presence
CC       of the kinase substrate, sphingosine (By similarity). In Purkinje
CC       cells, kinase activity on sphingosine increases in presence of VEGFA
CC       (PubMed:25417698). In neurons, kinase activity increases during the
CC       first 24h in presence of Amyloid-beta protein 42 to decrease after 96h
CC       (By similarity). {ECO:0000250|UniProtKB:Q8CI15,
CC       ECO:0000250|UniProtKB:Q91V26, ECO:0000269|PubMed:25417698}.
CC   -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC       Kinetic parameters:
CC         KM=14 uM for sphingosine {ECO:0000269|PubMed:10947957};
CC         KM=20 uM for dihydrosphingosine {ECO:0000269|PubMed:10947957};
CC         KM=77 uM for ATP {ECO:0000269|PubMed:10947957};
CC         KM=3.8 uM for 1-O-hexadecyl-2-amino-sn-glycerol
CC         {ECO:0000269|PubMed:11923095};
CC         KM=15.7 uM for sphing-4-enine {ECO:0000269|PubMed:11923095};
CC         KM=46 uM for sphinganine {ECO:0000269|PubMed:11923095};
CC         KM=24 uM for sphingosine {ECO:0000269|PubMed:18263879};
CC         KM=89 uM for ATP {ECO:0000269|PubMed:18263879};
CC         Note=kcat is 124 sec(-1) for sphingosine and increases to 304 sec(-1)
CC         upon interaction with EEF1A1. {ECO:0000269|PubMed:18263879};
CC       pH dependence:
CC         Optimum pH is 7.4. {ECO:0000269|PubMed:10947957};
CC   -!- SUBUNIT: Interacts with ACY1 (By similarity). Binds to calmodulin.
CC       Interacts with SPHKAP (PubMed:12080051). Interacts with CIB1, the
CC       interaction occurs in a calcium-dependent manner (PubMed:19854831).
CC       Interacts with TRAF2 (PubMed:20577214). Interacts with EEF1A1; the
CC       interaction enhances SPHK1 kinase activity (PubMed:18263879).
CC       {ECO:0000250|UniProtKB:Q8CI15, ECO:0000269|PubMed:12080051,
CC       ECO:0000269|PubMed:18263879, ECO:0000269|PubMed:19854831,
CC       ECO:0000269|PubMed:20577214}.
CC   -!- INTERACTION:
CC       Q9NYA1; P07858: CTSB; NbExp=4; IntAct=EBI-985303, EBI-715062;
CC       Q9NYA1; P68104: EEF1A1; NbExp=2; IntAct=EBI-985303, EBI-352162;
CC       Q9NYA1; Q14192: FHL2; NbExp=7; IntAct=EBI-985303, EBI-701903;
CC       Q9NYA1; Q2M3C7: SPHKAP; NbExp=4; IntAct=EBI-985303, EBI-1803914;
CC       Q9NYA1; Q9Y4K3: TRAF6; NbExp=2; IntAct=EBI-985303, EBI-359276;
CC       Q9NYA1-2; P13473-2: LAMP2; NbExp=3; IntAct=EBI-12512419, EBI-21591415;
CC       Q9NYA1-2; Q9Y371: SH3GLB1; NbExp=3; IntAct=EBI-12512419, EBI-2623095;
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:14575709,
CC       ECO:0000269|PubMed:19854831, ECO:0000269|PubMed:29662056}. Nucleus
CC       {ECO:0000269|PubMed:14575709, ECO:0000269|PubMed:19854831,
CC       ECO:0000269|PubMed:29662056}. Cell membrane
CC       {ECO:0000269|PubMed:19854831}. Endosome membrane
CC       {ECO:0000269|PubMed:24929359}; Peripheral membrane protein
CC       {ECO:0000269|PubMed:24929359}. Membrane, clathrin-coated pit
CC       {ECO:0000269|PubMed:24929359}. Synapse {ECO:0000250|UniProtKB:Q8CI15}.
CC       Note=Translocated from the cytoplasm to the plasma membrane in a CIB1-
CC       dependent manner (PubMed:19854831). Binds to membranes containing
CC       negatively charged lipids but not neutral lipids (PubMed:24929359).
CC       Recruited to endocytic membranes by sphingosine where promotes membrane
CC       fusion (By similarity). {ECO:0000250|UniProtKB:Q8CI15,
CC       ECO:0000269|PubMed:19854831, ECO:0000269|PubMed:24929359}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=3;
CC       Name=1;
CC         IsoId=Q9NYA1-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q9NYA1-2; Sequence=VSP_035453;
CC       Name=3;
CC         IsoId=Q9NYA1-3; Sequence=VSP_047078;
CC   -!- TISSUE SPECIFICITY: Widely expressed with highest levels in adult
CC       liver, kidney, heart and skeletal muscle. Expressed in brain cortex (at
CC       protein level) (PubMed:29662056). {ECO:0000269|PubMed:10802064,
CC       ECO:0000269|PubMed:29662056}.
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DR   EMBL; AF266756; AAF73470.1; -; mRNA.
DR   EMBL; AF238083; AAF73423.1; -; mRNA.
DR   EMBL; AF200328; AAG01980.1; -; mRNA.
DR   EMBL; AK023393; BAB14558.1; -; mRNA.
DR   EMBL; AK292294; BAF84983.1; -; mRNA.
DR   EMBL; AK022402; BAB14028.1; -; mRNA.
DR   EMBL; AJ245504; CAB92131.1; -; mRNA.
DR   EMBL; AC090699; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CH471099; EAW89392.1; -; Genomic_DNA.
DR   EMBL; CH471099; EAW89393.1; -; Genomic_DNA.
DR   EMBL; BC009419; AAH09419.1; -; mRNA.
DR   EMBL; BC014439; AAH14439.1; -; mRNA.
DR   EMBL; BC030553; AAH30553.1; -; mRNA.
DR   CCDS; CCDS11744.1; -. [Q9NYA1-2]
DR   CCDS; CCDS45785.1; -. [Q9NYA1-1]
DR   CCDS; CCDS59297.1; -. [Q9NYA1-3]
DR   RefSeq; NP_001136073.1; NM_001142601.1. [Q9NYA1-1]
DR   RefSeq; NP_001136074.1; NM_001142602.1. [Q9NYA1-1]
DR   RefSeq; NP_068807.2; NM_021972.3. [Q9NYA1-3]
DR   RefSeq; NP_892010.2; NM_182965.2. [Q9NYA1-2]
DR   RefSeq; XP_005257823.1; XM_005257766.2.
DR   PDB; 3VZB; X-ray; 2.00 A; A/B/C=9-364.
DR   PDB; 3VZC; X-ray; 2.30 A; A/B/C/D/E/F=9-364.
DR   PDB; 3VZD; X-ray; 2.30 A; A/B/C/D/E/F=9-364.
DR   PDB; 4L02; X-ray; 2.75 A; A/B/C=9-364.
DR   PDB; 4V24; X-ray; 1.80 A; A/B=1-363.
DR   PDBsum; 3VZB; -.
DR   PDBsum; 3VZC; -.
DR   PDBsum; 3VZD; -.
DR   PDBsum; 4L02; -.
DR   PDBsum; 4V24; -.
DR   AlphaFoldDB; Q9NYA1; -.
DR   SMR; Q9NYA1; -.
DR   BioGRID; 114396; 51.
DR   IntAct; Q9NYA1; 60.
DR   MINT; Q9NYA1; -.
DR   STRING; 9606.ENSP00000313681; -.
DR   BindingDB; Q9NYA1; -.
DR   ChEMBL; CHEMBL4394; -.
DR   DrugBank; DB08868; Fingolimod.
DR   GuidetoPHARMACOLOGY; 2204; -.
DR   SwissLipids; SLP:000000111; -.
DR   iPTMnet; Q9NYA1; -.
DR   PhosphoSitePlus; Q9NYA1; -.
DR   BioMuta; SPHK1; -.
DR   DMDM; 17369329; -.
DR   EPD; Q9NYA1; -.
DR   jPOST; Q9NYA1; -.
DR   MassIVE; Q9NYA1; -.
DR   MaxQB; Q9NYA1; -.
DR   PaxDb; Q9NYA1; -.
DR   PeptideAtlas; Q9NYA1; -.
DR   PRIDE; Q9NYA1; -.
DR   ProteomicsDB; 83202; -. [Q9NYA1-1]
DR   ProteomicsDB; 83203; -. [Q9NYA1-2]
DR   Antibodypedia; 19687; 754 antibodies from 48 providers.
DR   DNASU; 8877; -.
DR   Ensembl; ENST00000323374.8; ENSP00000313681.3; ENSG00000176170.14. [Q9NYA1-2]
DR   Ensembl; ENST00000392496.3; ENSP00000376285.2; ENSG00000176170.14. [Q9NYA1-1]
DR   Ensembl; ENST00000545180.5; ENSP00000440970.1; ENSG00000176170.14. [Q9NYA1-1]
DR   Ensembl; ENST00000590959.5; ENSP00000468547.1; ENSG00000176170.14. [Q9NYA1-3]
DR   Ensembl; ENST00000592299.6; ENSP00000465726.2; ENSG00000176170.14. [Q9NYA1-1]
DR   GeneID; 8877; -.
DR   KEGG; hsa:8877; -.
DR   MANE-Select; ENST00000592299.6; ENSP00000465726.2; NM_001142601.2; NP_001136073.1.
DR   UCSC; uc002jrf.1; human. [Q9NYA1-1]
DR   CTD; 8877; -.
DR   DisGeNET; 8877; -.
DR   GeneCards; SPHK1; -.
DR   HGNC; HGNC:11240; SPHK1.
DR   HPA; ENSG00000176170; Low tissue specificity.
DR   MIM; 603730; gene.
DR   neXtProt; NX_Q9NYA1; -.
DR   OpenTargets; ENSG00000176170; -.
DR   PharmGKB; PA36070; -.
DR   VEuPathDB; HostDB:ENSG00000176170; -.
DR   eggNOG; KOG1116; Eukaryota.
DR   GeneTree; ENSGT00940000157864; -.
DR   HOGENOM; CLU_013399_1_0_1; -.
DR   InParanoid; Q9NYA1; -.
DR   OMA; AECDLGT; -.
DR   OrthoDB; 681139at2759; -.
DR   PhylomeDB; Q9NYA1; -.
DR   TreeFam; TF354296; -.
DR   BRENDA; 2.7.1.91; 2681.
DR   PathwayCommons; Q9NYA1; -.
DR   Reactome; R-HSA-1660661; Sphingolipid de novo biosynthesis.
DR   Reactome; R-HSA-390471; Association of TriC/CCT with target proteins during biosynthesis.
DR   Reactome; R-HSA-5218921; VEGFR2 mediated cell proliferation.
DR   Reactome; R-HSA-9009391; Extra-nuclear estrogen signaling.
DR   SABIO-RK; Q9NYA1; -.
DR   SignaLink; Q9NYA1; -.
DR   SIGNOR; Q9NYA1; -.
DR   BioGRID-ORCS; 8877; 15 hits in 1083 CRISPR screens.
DR   ChiTaRS; SPHK1; human.
DR   GeneWiki; Sphingosine_kinase_1; -.
DR   GenomeRNAi; 8877; -.
DR   Pharos; Q9NYA1; Tchem.
DR   PRO; PR:Q9NYA1; -.
DR   Proteomes; UP000005640; Chromosome 17.
DR   RNAct; Q9NYA1; protein.
DR   Bgee; ENSG00000176170; Expressed in stromal cell of endometrium and 132 other tissues.
DR   ExpressionAtlas; Q9NYA1; baseline and differential.
DR   Genevisible; Q9NYA1; HS.
DR   GO; GO:0070161; C:anchoring junction; IEA:UniProtKB-KW.
DR   GO; GO:0005905; C:clathrin-coated pit; IDA:UniProtKB.
DR   GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
DR   GO; GO:0005829; C:cytosol; IDA:HPA.
DR   GO; GO:0031901; C:early endosome membrane; IDA:UniProtKB.
DR   GO; GO:0030139; C:endocytic vesicle; ISS:UniProtKB.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0016020; C:membrane; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0005886; C:plasma membrane; IDA:UniProtKB.
DR   GO; GO:0098793; C:presynapse; ISS:UniProtKB.
DR   GO; GO:0016407; F:acetyltransferase activity; ISS:UniProtKB.
DR   GO; GO:0005524; F:ATP binding; IDA:UniProtKB.
DR   GO; GO:0005516; F:calmodulin binding; IDA:UniProtKB.
DR   GO; GO:0017050; F:D-erythro-sphingosine kinase activity; IDA:UniProtKB.
DR   GO; GO:0003677; F:DNA binding; IDA:MGI.
DR   GO; GO:0008289; F:lipid binding; IDA:UniProtKB.
DR   GO; GO:0001727; F:lipid kinase activity; IBA:GO_Central.
DR   GO; GO:0000287; F:magnesium ion binding; IDA:UniProtKB.
DR   GO; GO:0003951; F:NAD+ kinase activity; IEA:InterPro.
DR   GO; GO:0051721; F:protein phosphatase 2A binding; IPI:BHF-UCL.
DR   GO; GO:0008481; F:sphinganine kinase activity; IDA:UniProtKB.
DR   GO; GO:0038036; F:sphingosine-1-phosphate receptor activity; IMP:UniProtKB.
DR   GO; GO:0001568; P:blood vessel development; IEA:Ensembl.
DR   GO; GO:0007420; P:brain development; IEA:Ensembl.
DR   GO; GO:0019722; P:calcium-mediated signaling; IDA:UniProtKB.
DR   GO; GO:0008283; P:cell population proliferation; IEA:Ensembl.
DR   GO; GO:0071363; P:cellular response to growth factor stimulus; IBA:GO_Central.
DR   GO; GO:0070301; P:cellular response to hydrogen peroxide; IEA:Ensembl.
DR   GO; GO:0035924; P:cellular response to vascular endothelial growth factor stimulus; IDA:UniProtKB.
DR   GO; GO:0071897; P:DNA biosynthetic process; IEA:Ensembl.
DR   GO; GO:0006954; P:inflammatory response; IEA:Ensembl.
DR   GO; GO:0035556; P:intracellular signal transduction; TAS:UniProtKB.
DR   GO; GO:0043066; P:negative regulation of apoptotic process; IDA:MGI.
DR   GO; GO:1900060; P:negative regulation of ceramide biosynthetic process; IDA:UniProtKB.
DR   GO; GO:0016310; P:phosphorylation; IBA:GO_Central.
DR   GO; GO:0045766; P:positive regulation of angiogenesis; IDA:UniProtKB.
DR   GO; GO:0030307; P:positive regulation of cell growth; IDA:UniProtKB.
DR   GO; GO:0030335; P:positive regulation of cell migration; IDA:UniProtKB.
DR   GO; GO:0048146; P:positive regulation of fibroblast proliferation; IDA:MGI.
DR   GO; GO:0032740; P:positive regulation of interleukin-17 production; ISS:UniProtKB.
DR   GO; GO:0045931; P:positive regulation of mitotic cell cycle; IDA:UniProtKB.
DR   GO; GO:0045840; P:positive regulation of mitotic nuclear division; IEA:Ensembl.
DR   GO; GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IMP:UniProtKB.
DR   GO; GO:1901224; P:positive regulation of NIK/NF-kappaB signaling; IMP:UniProtKB.
DR   GO; GO:1900745; P:positive regulation of p38MAPK cascade; IDA:UniProtKB.
DR   GO; GO:0010800; P:positive regulation of peptidyl-threonine phosphorylation; IMP:UniProtKB.
DR   GO; GO:0031398; P:positive regulation of protein ubiquitination; IDA:UniProtKB.
DR   GO; GO:0045987; P:positive regulation of smooth muscle contraction; IDA:UniProtKB.
DR   GO; GO:0006473; P:protein acetylation; ISS:UniProtKB.
DR   GO; GO:0030100; P:regulation of endocytosis; IDA:UniProtKB.
DR   GO; GO:1905364; P:regulation of endosomal vesicle fusion; ISS:UniProtKB.
DR   GO; GO:0032651; P:regulation of interleukin-1 beta production; IEA:Ensembl.
DR   GO; GO:1903978; P:regulation of microglial cell activation; ISS:UniProtKB.
DR   GO; GO:0150077; P:regulation of neuroinflammatory response; ISS:UniProtKB.
DR   GO; GO:0050764; P:regulation of phagocytosis; ISS:UniProtKB.
DR   GO; GO:0010803; P:regulation of tumor necrosis factor-mediated signaling pathway; IDA:UniProtKB.
DR   GO; GO:0034612; P:response to tumor necrosis factor; IDA:UniProtKB.
DR   GO; GO:0046521; P:sphingoid catabolic process; NAS:UniProtKB.
DR   GO; GO:0030148; P:sphingolipid biosynthetic process; TAS:Reactome.
DR   GO; GO:0006665; P:sphingolipid metabolic process; IBA:GO_Central.
DR   GO; GO:0046512; P:sphingosine biosynthetic process; IMP:UniProtKB.
DR   GO; GO:0006670; P:sphingosine metabolic process; IDA:UniProtKB.
DR   Gene3D; 3.40.50.10330; -; 1.
DR   InterPro; IPR017438; ATP-NAD_kinase_N.
DR   InterPro; IPR001206; Diacylglycerol_kinase_cat_dom.
DR   InterPro; IPR016064; NAD/diacylglycerol_kinase_sf.
DR   Pfam; PF00781; DAGK_cat; 1.
DR   SMART; SM00046; DAGKc; 1.
DR   SUPFAM; SSF111331; SSF111331; 1.
DR   PROSITE; PS50146; DAGK; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Alternative splicing; ATP-binding; Calmodulin-binding;
KW   Cell membrane; Coated pit; Cytoplasm; Endosome; Kinase; Lipid metabolism;
KW   Membrane; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome;
KW   Synapse; Transferase.
FT   CHAIN           1..384
FT                   /note="Sphingosine kinase 1"
FT                   /id="PRO_0000181357"
FT   DOMAIN          12..159
FT                   /note="DAGKc"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00783"
FT   MOTIF           147..155
FT                   /note="Nuclear export signal 1"
FT                   /evidence="ECO:0000269|PubMed:14575709"
FT   MOTIF           161..169
FT                   /note="Nuclear export signal 2"
FT                   /evidence="ECO:0000269|PubMed:14575709"
FT   ACT_SITE        81
FT                   /note="Proton donor/acceptor"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         22..24
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         54..58
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         79..82
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         86
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         111..113
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         178
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         185
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         191
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   BINDING         341..343
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   MOD_RES         193
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:18669648"
FT   MOD_RES         225
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:20577214"
FT   VAR_SEQ         1
FT                   /note="M -> MSAQVLGFLRSWTPLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSR
FT                   PCDARLGSTDKELKAGAAATGSAPTAPGTPWQREPRVEVM (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:14702039,
FT                   ECO:0000303|PubMed:15489334"
FT                   /id="VSP_035453"
FT   VAR_SEQ         3
FT                   /note="P -> PVVGCGRGLFGFVFS (in isoform 3)"
FT                   /evidence="ECO:0000303|PubMed:15489334"
FT                   /id="VSP_047078"
FT   MUTAGEN         81
FT                   /note="D->A: Loss of enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   MUTAGEN         81
FT                   /note="D->N: Strongly reduced enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:23602659"
FT   MUTAGEN         82
FT                   /note="G->D: Loss of enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:20577214"
FT   MUTAGEN         194
FT                   /note="L->Q: Loss of binding to negatively charged
FT                   membranes, diffuse cytosolic distribution."
FT                   /evidence="ECO:0000269|PubMed:24929359"
FT   MUTAGEN         197..198
FT                   /note="FL->AA: Abolishes interaction with CIB1."
FT                   /evidence="ECO:0000269|PubMed:19854831"
FT   MUTAGEN         197..198
FT                   /note="FL->AQ: Loss of binding to negatively charged
FT                   membranes, diffuse cytosolic distribution."
FT                   /evidence="ECO:0000269|PubMed:24929359"
FT   CONFLICT        6
FT                   /note="Missing (in Ref. 4; CAB92131)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        11..15
FT                   /note="LPRPC -> ARL (in Ref. 4; CAB92131)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        114..115
FT                   /note="NA -> KP (in Ref. 4; CAB92131)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        251
FT                   /note="V -> M (in Ref. 2; AAF73423)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        260
FT                   /note="V -> I (in Ref. 2; AAF73423)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        302
FT                   /note="L -> F (in Ref. 2; AAF73423)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        325
FT                   /note="V -> G (in Ref. 4; CAB92131)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        337
FT                   /note="V -> M (in Ref. 3; AAG01980)"
FT                   /evidence="ECO:0000305"
FT   STRAND          13..21
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   TURN            26..29
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           30..37
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           39..44
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          47..53
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           59..66
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           69..71
FT                   /evidence="ECO:0007829|PDB:3VZB"
FT   STRAND          73..80
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           81..92
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           97..100
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          105..109
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           115..123
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           131..144
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          146..157
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          162..172
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           173..181
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           182..190
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           191..201
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          206..214
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           215..218
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          230..232
FT                   /evidence="ECO:0007829|PDB:3VZB"
FT   STRAND          249..251
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          255..266
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          285..291
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           296..305
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           306..308
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   HELIX           311..314
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          319..331
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          333..335
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          337..340
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          343..346
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   STRAND          350..362
FT                   /evidence="ECO:0007829|PDB:4V24"
FT   VARIANT         Q9NYA1-2:34
FT                   /note="A -> T (in dbSNP:rs346803)"
FT                   /evidence="ECO:0000305"
FT                   /id="VAR_082919"
SQ   SEQUENCE   384 AA;  42518 MW;  EB04A7F2034C2DB0 CRC64;
     MDPAGGPRGV LPRPCRVLVL LNPRGGKGKA LQLFRSHVQP LLAEAEISFT LMLTERRNHA
     RELVRSEELG RWDALVVMSG DGLMHEVVNG LMERPDWETA IQKPLCSLPA GSGNALAASL
     NHYAGYEQVT NEDLLTNCTL LLCRRLLSPM NLLSLHTASG LRLFSVLSLA WGFIADVDLE
     SEKYRRLGEM RFTLGTFLRL AALRTYRGRL AYLPVGRVGS KTPASPVVVQ QGPVDAHLVP
     LEEPVPSHWT VVPDEDFVLV LALLHSHLGS EMFAAPMGRC AAGVMHLFYV RAGVSRAMLL
     RLFLAMEKGR HMEYECPYLV YVPVVAFRLE PKDGKGVFAV DGELMVSEAV QGQVHPNYFW
     MVSGCVEPPP SWKPQQMPPP EEPL
 
 
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