SPIC_HUMAN
ID SPIC_HUMAN Reviewed; 248 AA.
AC Q8N5J4;
DT 05-JUL-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 150.
DE RecName: Full=Transcription factor Spi-C;
GN Name=SPIC;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RX PubMed=12459275; DOI=10.1016/s0378-1119(02)01078-8;
RA Carlsson R., Hjalmarsson A., Liberg D., Persson C., Leanderson T.;
RT "Genomic structure of mouse SPI-C and genomic structure and expression
RT pattern of human SPI-C.";
RL Gene 299:271-278(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Pancreas;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Controls the development of red pulp macrophages required for
CC red blood cells recycling and iron homeostasis. Transcription factor
CC that binds to the PU-box, a purine-rich DNA sequence (5'-GAGGA[AT]-3')
CC that can act as a lymphoid-specific enhancer. Regulates VCAM1 gene
CC expression (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Binds DNA as a monomer.
CC -!- INTERACTION:
CC Q8N5J4; Q5TA45: INTS11; NbExp=3; IntAct=EBI-12261246, EBI-748258;
CC Q8N5J4; P50221: MEOX1; NbExp=3; IntAct=EBI-12261246, EBI-2864512;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Preferentially detected in fetal and adult spleen,
CC lymph nodes and at lower levels in bone marrow and fetal liver.
CC {ECO:0000269|PubMed:12459275}.
CC -!- SIMILARITY: Belongs to the ETS family. {ECO:0000305}.
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DR EMBL; BC032317; AAH32317.1; -; mRNA.
DR EMBL; AF518404; AAN84476.1; -; mRNA.
DR CCDS; CCDS9082.1; -.
DR RefSeq; NP_689536.1; NM_152323.2.
DR RefSeq; XP_005268703.1; XM_005268646.3.
DR RefSeq; XP_006719302.1; XM_006719239.3.
DR AlphaFoldDB; Q8N5J4; -.
DR SMR; Q8N5J4; -.
DR BioGRID; 125739; 4.
DR IntAct; Q8N5J4; 3.
DR STRING; 9606.ENSP00000448580; -.
DR PhosphoSitePlus; Q8N5J4; -.
DR BioMuta; SPIC; -.
DR DMDM; 68566054; -.
DR PaxDb; Q8N5J4; -.
DR PRIDE; Q8N5J4; -.
DR ProteomicsDB; 72069; -.
DR Antibodypedia; 30388; 143 antibodies from 23 providers.
DR DNASU; 121599; -.
DR Ensembl; ENST00000551346.2; ENSP00000448580.1; ENSG00000166211.8.
DR GeneID; 121599; -.
DR KEGG; hsa:121599; -.
DR MANE-Select; ENST00000551346.2; ENSP00000448580.1; NM_152323.3; NP_689536.1.
DR UCSC; uc001tid.3; human.
DR CTD; 121599; -.
DR DisGeNET; 121599; -.
DR GeneCards; SPIC; -.
DR HGNC; HGNC:29549; SPIC.
DR HPA; ENSG00000166211; Tissue enriched (lymphoid).
DR MIM; 612568; gene.
DR neXtProt; NX_Q8N5J4; -.
DR OpenTargets; ENSG00000166211; -.
DR PharmGKB; PA134897775; -.
DR VEuPathDB; HostDB:ENSG00000166211; -.
DR eggNOG; KOG3805; Eukaryota.
DR GeneTree; ENSGT00940000155067; -.
DR HOGENOM; CLU_098156_0_0_1; -.
DR InParanoid; Q8N5J4; -.
DR OMA; EIFYSPY; -.
DR OrthoDB; 1272250at2759; -.
DR PhylomeDB; Q8N5J4; -.
DR TreeFam; TF318679; -.
DR PathwayCommons; Q8N5J4; -.
DR SignaLink; Q8N5J4; -.
DR BioGRID-ORCS; 121599; 25 hits in 1038 CRISPR screens.
DR GenomeRNAi; 121599; -.
DR Pharos; Q8N5J4; Tbio.
DR PRO; PR:Q8N5J4; -.
DR Proteomes; UP000005640; Chromosome 12.
DR RNAct; Q8N5J4; protein.
DR Bgee; ENSG00000166211; Expressed in spleen and 37 other tissues.
DR Genevisible; Q8N5J4; HS.
DR GO; GO:0000785; C:chromatin; ISA:NTNU_SB.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IEA:Ensembl.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; ISA:NTNU_SB.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IEA:Ensembl.
DR GO; GO:0001824; P:blastocyst development; IEA:Ensembl.
DR GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR000418; Ets_dom.
DR InterPro; IPR046328; ETS_fam.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR11849; PTHR11849; 1.
DR Pfam; PF00178; Ets; 1.
DR PRINTS; PR00454; ETSDOMAIN.
DR SMART; SM00413; ETS; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS00346; ETS_DOMAIN_2; 1.
DR PROSITE; PS50061; ETS_DOMAIN_3; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..248
FT /note="Transcription factor Spi-C"
FT /id="PRO_0000204140"
FT DNA_BIND 111..194
FT /note="ETS"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00237"
SQ SEQUENCE 248 AA; 29180 MW; D4DC97EA0FFEE71E CRC64;
MTCVEQDKLG QAFEDAFEVL RQHSTGDLQY SPDYRNYLAL INHRPHVKGN SSCYGVLPTE
EPVYNWRTVI NSAADFYFEG NIHQSLQNIT ENQLVQPTLL QQKGGKGRKK LRLFEYLHES
LYNPEMASCI QWVDKTKGIF QFVSKNKEKL AELWGKRKGN RKTMTYQKMA RALRNYGRSG
EITKIRRKLT YQFSEAILQR LSPSYFLGKE IFYSQCVQPD QEYLSLNNWN ANYNYTYANY
HELNHHDC