SPN1_CHICK
ID SPN1_CHICK Reviewed; 365 AA.
AC Q5ZI43;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=Snurportin-1;
DE AltName: Full=RNA U transporter 1;
GN Name=SNUPN; Synonyms=RNUT1; ORFNames=RCJMB04_30h8;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Functions as an U snRNP-specific nuclear import adapter.
CC Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import
CC of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs.
CC {ECO:0000250|UniProtKB:O95149}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:O95149}. Cytoplasm
CC {ECO:0000250|UniProtKB:O95149}. Note=Nucleoplasmic shuttling protein.
CC {ECO:0000250|UniProtKB:O95149}.
CC -!- SIMILARITY: Belongs to the snurportin family. {ECO:0000305}.
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DR EMBL; AJ720941; CAG32600.1; -; mRNA.
DR RefSeq; NP_001074347.1; NM_001080878.1.
DR AlphaFoldDB; Q5ZI43; -.
DR SMR; Q5ZI43; -.
DR STRING; 9031.ENSGALP00000041377; -.
DR GeneID; 770225; -.
DR KEGG; gga:770225; -.
DR CTD; 10073; -.
DR VEuPathDB; HostDB:geneid_770225; -.
DR eggNOG; KOG3132; Eukaryota.
DR InParanoid; Q5ZI43; -.
DR OrthoDB; 1342398at2759; -.
DR PhylomeDB; Q5ZI43; -.
DR PRO; PR:Q5ZI43; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042564; C:NLS-dependent protein nuclear import complex; IEA:Ensembl.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0061608; F:nuclear import signal receptor activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006606; P:protein import into nucleus; IEA:InterPro.
DR GO; GO:0061015; P:snRNA import into nucleus; IEA:InterPro.
DR InterPro; IPR002652; Importin-a_IBB.
DR InterPro; IPR017336; Snurportin-1.
DR InterPro; IPR024721; Snurportin-1_N.
DR PANTHER; PTHR13403; PTHR13403; 1.
DR Pfam; PF11538; Snurportin1; 1.
DR PIRSF; PIRSF037955; Snurportin-1; 1.
DR PROSITE; PS51214; IBB; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Nucleus; Reference proteome; RNA-binding; Transport.
FT CHAIN 1..365
FT /note="Snurportin-1"
FT /id="PRO_0000191074"
FT DOMAIN 10..72
FT /note="IBB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00561"
FT REGION 15..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 69..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 129..131
FT /note="Interaction with m3G-cap structure"
FT /evidence="ECO:0000250|UniProtKB:O95149"
FT REGION 211..333
FT /note="Necessary for binding to the m3G-cap structure"
FT /evidence="ECO:0000250|UniProtKB:O95149"
FT REGION 317..365
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..87
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 345..365
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 107
FT /note="Interaction with m3G-cap structure"
FT /evidence="ECO:0000250|UniProtKB:O95149"
FT SITE 146
FT /note="Interaction with m3G-cap structure"
FT /evidence="ECO:0000250|UniProtKB:O95149"
FT SITE 279
FT /note="Interaction with m3G-cap structure"
FT /evidence="ECO:0000250|UniProtKB:O95149"
SQ SEQUENCE 365 AA; 40742 MW; 39F5572397E47C77 CRC64;
MEELCAALAG GVALAAPNSP AAPHPRLSAY KGRGDRLGQA ERRRRLLCLQ RERRLDYVNH
ARRLAEGDWA GVESDEDGGE DGDGEEEMEV DAGRRLPKRY ANQLMLSEWL VDVPVDLEQE
WIVVVCPVGK RALVVASRGS TAAYTKSGFC VNRFPSLLPG GNRHNTMNEK VYCILDCIYN
EAEQTYYILD VMCWRGHPVY DCQTDFRFFW LSSKIQEEEG LGEKSRINPY KFVGLQNFPC
TSESLCEVLT TNFPFEVDGL LFYHKQTHYT PGSTPLVGWL RPYMVPDILG LTVPATPLTA
KPDYAGRQLQ QIIESKRSKK LAAGKAQPSA EAAARNGHYE LEHLSTPQPA NSAQGQEEAG
SQMEN