SPNE_DROMO
ID SPNE_DROMO Reviewed; 1431 AA.
AC B4K5R2;
DT 02-MAR-2010, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=Probable ATP-dependent RNA helicase spindle-E;
DE EC=3.6.4.13;
DE AltName: Full=Homeless;
GN Name=spn-E; Synonyms=hls; ORFNames=GI22949;
OS Drosophila mojavensis (Fruit fly).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC Drosophilidae; Drosophila.
OX NCBI_TaxID=7230;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tucson 15081-1352.22;
RX PubMed=17994087; DOI=10.1038/nature06341;
RG Drosophila 12 genomes consortium;
RT "Evolution of genes and genomes on the Drosophila phylogeny.";
RL Nature 450:203-218(2007).
CC -!- FUNCTION: Probable ATP-binding RNA helicase which plays a central role
CC during spermatogenesis and oogenesis by repressing transposable
CC elements and preventing their mobilization, which is essential for the
CC germline integrity. Acts via the piRNA metabolic process, which
CC mediates the repression of transposable elements during meiosis by
CC forming complexes composed of piRNAs and Piwi and govern the
CC methylation and subsequent repression of transposons. Involved in the
CC repression of LTR retrotransposon copia. Also involved in telomere
CC regulation by repressing specialized telomeric retroelements HeT-A,
CC TAHRE, and TART; Drosophila telomeres being maintained by transposition
CC of specialized telomeric retroelements. Involved in telomeric trans-
CC silencing, a repression mechanism by which a transposon or a transgene
CC inserted in subtelomeric heterochromatin has the capacity to repress in
CC trans in the female germline, a homologous transposon, or transgene
CC located in euchromatin. Involved in the repression of testis-expressed
CC Stellate genes by the homologous Su(Ste) repeats. Required for
CC anteroposterior and dorsoventral axis formation during oogenesis (By
CC similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Note=Component of the
CC nuage, also named P granule, a germ-cell-specific organelle required to
CC repress transposon during meiosis. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH subfamily.
CC {ECO:0000305}.
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DR EMBL; CH933806; EDW15124.1; -; Genomic_DNA.
DR RefSeq; XP_001999663.1; XM_001999627.2.
DR AlphaFoldDB; B4K5R2; -.
DR SMR; B4K5R2; -.
DR STRING; 7230.FBpp0172166; -.
DR PRIDE; B4K5R2; -.
DR EnsemblMetazoa; FBtr0173674; FBpp0172166; FBgn0145676.
DR GeneID; 6573595; -.
DR KEGG; dmo:Dmoj_GI22949; -.
DR eggNOG; KOG0920; Eukaryota.
DR HOGENOM; CLU_002601_1_0_1; -.
DR InParanoid; B4K5R2; -.
DR OMA; DPCRTVY; -.
DR OrthoDB; 278674at2759; -.
DR PhylomeDB; B4K5R2; -.
DR Proteomes; UP000009192; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0048477; P:oogenesis; IEA:UniProtKB-KW.
DR GO; GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
DR CDD; cd04508; TUDOR; 1.
DR Gene3D; 2.40.50.90; -; 1.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR035437; SNase_OB-fold_sf.
DR InterPro; IPR002999; Tudor.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF04408; HA2; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00567; TUDOR; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00333; TUDOR; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50304; TUDOR; 1.
PE 3: Inferred from homology;
KW ATP-binding; Cytoplasm; Developmental protein; Differentiation; Helicase;
KW Hydrolase; Meiosis; Nucleotide-binding; Oogenesis; Reference proteome;
KW RNA-mediated gene silencing; Spermatogenesis.
FT CHAIN 1..1431
FT /note="Probable ATP-dependent RNA helicase spindle-E"
FT /id="PRO_0000391917"
FT DOMAIN 127..294
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 354..526
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT DOMAIN 937..1000
FT /note="Tudor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00211"
FT MOTIF 240..243
FT /note="DEAH box"
FT BINDING 140..147
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 1431 AA; 165000 MW; E768189B3336487F CRC64;
MDSDLMDFFD FSKQFSRAPA PKGYITGDPT AFATETIDSK PIKRELIGKD YVHEVVEKEK
HLMKKLADGY NTSKNRRTLD ELDSDDDEVL MKELPSVRSD EEYYKKYRFD LNRNKNLPIY
EQREDILAAI RENPVVILKG ETGCGKTTQV PQYILDEAFK RREFCNIVVT QPRRIAAISI
ANRVCHERKW QPGTVCSYQV GLHRQSNLED TRLLYCTTGV LLNNLVRVKT LTQYTHIILD
EVHERDQDMD FLLLVVRRLL ALNSRHVKVI LMSATIDTRE FSKYFAMSSS LPPVVTASHG
RKFPLVKFYR DQLKNIHWKD EPQRTTPGIG PEGYSDAIKL LLVIDNMERK ADNQSQQSYE
EAKRTGAVLI FLPGIHEIDT MAEHIGRIVD ENPNFKISIV RCHSLMSPDS QEEVFLPPPL
GHRKVILTTN ISESSITVPD VSYVIDFCLT KVLHTDTASN FSSLRLEWAS KVNCRQRAGR
VGRLRSGRVY RMVTKDFYMN HMNEFGIPEM LRSPLQNSVL KAKELEMGNP SEILALAMSP
PNLSDIQNTV LLLKEVGALY TTVDGVYEEL DGDLSFWGKI MSKFPLDVRL SRLIILGYVF
NCLDEAIVIA AGMTVRSLYV TGSRGQMNEA FWMHYIFADG SGSDMIGIWR VYRIYLNMCQ
DRMLKESAQQ WARRFNVNLR SLKEMHLMVQ DLRQRCASLN IQPLPYGACH MWDDREKSII
LKVIIAGAFY PNYFMRSNKA NADYDRSLFQ TICGNDPCRT VYFTNFEPRY MGELYTRRIK
ELFLEAKIPP ENIDVTFQHG SEKVFVTFKP DDEDIDTTKV VQVPGRVMTE VYKAVRMRLE
NQNRPLRVMD QNSAFKYVEQ NRIGVISDCT WVPPSNQWPV ELLTLPSVFD KTIFGLITHV
ANCGKFYFQP QALAERIASM SEIFNRSLEL SCYVQNAKAV TKGLQLLAKR GNLYQRAVVL
KVETQINGYP RFRVRFIDYG DVAVVPIDKL RLMSPQLKRD FERLPPRMFE CRLALVQPSS
VASSYNQWPQ HANEMLISVA KSGRVELEIY SLVNNVAAVL IHTRGGVLND MLVDRQLARR
ADEDYMSRKD HDLRLRKQET KRNVSITDQR LINEEYLRFA QLPKDTDLEP PPLNKCNLSI
RLKGPYSPLE ASLNSLLRIG MYKSVYIDKE SVNSVLLDSD PQDRHDQMVV AASVTEAFDN
LTVRGTTLMP NIHGFGALMA MLFCPTMQIK CNKDRTKYVS ILAGLGYNPD TMQPHFEEHD
MVINLDVAIL KDDIRIINQM RYNIDSMFYN FDVNEMPSVG TEDRVVIFNQ LRSLLIRLLG
KDRSFIERHV SNFEYLWEDM SDLEPPSEPY GKRAIFPMHS SYDFESENMG NLLSLQANCK
ELYSWRNFEG TMQPMKCRLC NDTLESVAEL RLHLLTQLHR DREKQVGWKQ N