SPT16_ASHGO
ID SPT16_ASHGO Reviewed; 1031 AA.
AC Q756A7;
DT 11-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2013, sequence version 2.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=FACT complex subunit SPT16;
DE AltName: Full=Facilitates chromatin transcription complex subunit SPT16;
GN Name=SPT16; OrderedLocusNames=AER360C;
OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
OS (Yeast) (Eremothecium gossypii).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Eremothecium.
OX NCBI_TaxID=284811;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056;
RX PubMed=15001715; DOI=10.1126/science.1095781;
RA Dietrich F.S., Voegeli S., Brachat S., Lerch A., Gates K., Steiner S.,
RA Mohr C., Poehlmann R., Luedi P., Choi S., Wing R.A., Flavier A.,
RA Gaffney T.D., Philippsen P.;
RT "The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces
RT cerevisiae genome.";
RL Science 304:304-307(2004).
RN [2]
RP GENOME REANNOTATION, AND SEQUENCE REVISION TO 55 AND 1022-1023.
RC STRAIN=ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056;
RX PubMed=23749448; DOI=10.1534/g3.112.002881;
RA Dietrich F.S., Voegeli S., Kuo S., Philippsen P.;
RT "Genomes of Ashbya fungi isolated from insects reveal four mating-type
RT loci, numerous translocations, lack of transposons, and distinct gene
RT duplications.";
RL G3 (Bethesda) 3:1225-1239(2013).
CC -!- FUNCTION: Component of the FACT complex, a general chromatin factor
CC that acts to reorganize nucleosomes. The FACT complex is involved in
CC multiple processes that require DNA as a template such as mRNA
CC elongation, DNA replication and DNA repair. During transcription
CC elongation the FACT complex acts as a histone chaperone that both
CC destabilizes and restores nucleosomal structure. It facilitates the
CC passage of RNA polymerase II and transcription by promoting the
CC dissociation of one histone H2A-H2B dimer from the nucleosome, then
CC subsequently promotes the reestablishment of the nucleosome following
CC the passage of RNA polymerase II (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Forms a stable heterodimer with POB3. The SPT16-POB3 dimer
CC weakly associates with multiple molecules of NHP6 to form the FACT
CC complex (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Chromosome {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the peptidase M24 family. SPT16 subfamily.
CC {ECO:0000305}.
CC -!- CAUTION: Although related to the peptidase M24 family, this protein
CC lacks conserved active site residues suggesting that it may lack
CC peptidase activity. {ECO:0000305}.
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DR EMBL; AE016818; AAS53040.2; -; Genomic_DNA.
DR RefSeq; NP_985216.2; NM_210570.2.
DR PDB; 6A8M; X-ray; 1.70 A; A=2-460.
DR PDBsum; 6A8M; -.
DR AlphaFoldDB; Q756A7; -.
DR SMR; Q756A7; -.
DR STRING; 33169.AAS53040; -.
DR PRIDE; Q756A7; -.
DR EnsemblFungi; AAS53040; AAS53040; AGOS_AER360C.
DR GeneID; 4621432; -.
DR KEGG; ago:AGOS_AER360C; -.
DR eggNOG; KOG1189; Eukaryota.
DR HOGENOM; CLU_004627_1_0_1; -.
DR InParanoid; Q756A7; -.
DR OMA; HQFFLDG; -.
DR Proteomes; UP000000591; Chromosome V.
DR GO; GO:0035101; C:FACT complex; IBA:GO_Central.
DR GO; GO:0031298; C:replication fork protection complex; IEA:EnsemblFungi.
DR GO; GO:0042393; F:histone binding; IEA:EnsemblFungi.
DR GO; GO:0031491; F:nucleosome binding; IBA:GO_Central.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0034724; P:DNA replication-independent chromatin organization; IBA:GO_Central.
DR GO; GO:0006261; P:DNA-templated DNA replication; IEA:EnsemblFungi.
DR GO; GO:0006334; P:nucleosome assembly; IEA:EnsemblFungi.
DR GO; GO:0045899; P:positive regulation of RNA polymerase II transcription preinitiation complex assembly; IEA:EnsemblFungi.
DR GO; GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR GO; GO:0007063; P:regulation of sister chromatid cohesion; IEA:EnsemblFungi.
DR GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR Gene3D; 2.30.29.30; -; 1.
DR Gene3D; 3.40.350.10; -; 1.
DR Gene3D; 3.90.230.10; -; 1.
DR InterPro; IPR029149; Creatin/AminoP/Spt16_NTD.
DR InterPro; IPR036005; Creatinase/aminopeptidase-like.
DR InterPro; IPR013719; DUF1747.
DR InterPro; IPR029148; FACT-Spt16_Nlobe.
DR InterPro; IPR013953; FACT_Spt16.
DR InterPro; IPR000994; Pept_M24.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR040258; Spt16.
DR PANTHER; PTHR13980; PTHR13980; 1.
DR Pfam; PF14826; FACT-Spt16_Nlob; 1.
DR Pfam; PF00557; Peptidase_M24; 1.
DR Pfam; PF08512; Rtt106; 1.
DR Pfam; PF08644; SPT16; 1.
DR SMART; SM01285; FACT-Spt16_Nlob; 1.
DR SMART; SM01287; Rtt106; 1.
DR SMART; SM01286; SPT16; 1.
DR SUPFAM; SSF55920; SSF55920; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Chromosome; Coiled coil; DNA damage; DNA repair;
KW DNA replication; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..1031
FT /note="FACT complex subunit SPT16"
FT /id="PRO_0000245178"
FT REGION 450..501
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 952..1031
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 478..499
FT /evidence="ECO:0000255"
FT COMPBIAS 450..464
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 471..501
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 957..1013
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1014..1031
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT HELIX 8..21
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 22..24
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 30..36
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 47..56
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 61..67
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 69..76
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 78..94
FT /evidence="ECO:0007829|PDB:6A8M"
FT TURN 95..98
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 100..105
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 112..127
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 129..133
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 142..157
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 161..164
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 166..173
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 178..207
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 214..223
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 224..226
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 228..232
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 235..238
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 239..241
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 250..252
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 253..257
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 260..262
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 264..266
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 277..279
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 283..290
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 292..294
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 301..308
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 311..329
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 338..352
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 354..356
FT /evidence="ECO:0007829|PDB:6A8M"
FT TURN 357..359
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 362..367
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 369..373
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 377..382
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 393..404
FT /evidence="ECO:0007829|PDB:6A8M"
FT TURN 406..408
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 411..423
FT /evidence="ECO:0007829|PDB:6A8M"
FT STRAND 426..429
FT /evidence="ECO:0007829|PDB:6A8M"
FT HELIX 437..440
FT /evidence="ECO:0007829|PDB:6A8M"
SQ SEQUENCE 1031 AA; 117773 MW; 6D9FD826D57C267B CRC64;
MSEVIIDFST FENRLLALRD RFPSFDGSPS SLVFILGSAD EENPYQKTTI LHNWLLGYEF
PTTLIAVFKE GCVVITSAAK TRYLEEGVAQ MNKKLENTFK IELWQSSKEP GHNLKLFEDL
VERVREAGSA VGLATKDSYQ GKFITEWKGV WDTAVEKHGL NGVDVSLGLS SLWAVKDEKE
QAYLQVSSRG SDKFMNLLSD ELVRAVDEEI KITDAKLSDN VENEIDKSRF LKKLSPELTP
LCPKGEKFDV NYLDWAYSPI IQSGPKYDLR VSARSSETQL DGNGCILASC GIRYKNYCSN
ISRTFLIDPS DEMTDNYDFL LLLQEEIINN LLRVGATPKQ IYDGAVNYIN SKKPELSAGF
TKNVGSLMGL EFRDSQFVLN NKNDYRKVEN GDCFNISLGF NNLKDSKTGA SYALQLADTV
QLTSGGPKVL TNYTKSRSQI SFYFNNEDDG TTKVKSEESK TASIPTKPDP KSKILRSKLR
GESRAEDDEK EQIRKENQRK LHEKLQREGL LRFTDTDAAD KDQKPVVHFK KYESYVRETQ
IPNTVRDLRI HVDWKNQTFI LPIYGRPVPF HINSYKNGSK NEEGEYTYIR LNFHSPGTGG
VSKKTEELPY EDSPDHQFVR SLTLRSKDGD RMADIFKQIT ELKKESTKRE QERKVLADVV
EQAKLVENRT GRTKRLDQIF VRPSPDTKRV PGTVFIHENG IRYQSPLRTD SRIDILFSNV
KNLFFQPCKG ELIVIIHIHL KNPILMGKKK IQDVQFYREA SDMAVDETGN GRRNQMKFRR
YGDEDELEQE QEERRKRAAL DKEFRYFAEA IAEASNGLVE VDHPFRDLGF QGVPSRSAVF
CMPTRDCLIQ LVEPPFLVVN LSEVEICILE RVQFGLKNFD MVFVYKDFTK PVTHINTIPI
EQLEFIKSWL TDVDIPYTVS TINLNWATIM KSLQDDPHQF FLDGGWSFLA TGSDDEMSGT
SEEEVSEYEV SDEDPSDEEV DSEDDYSEGD NEEFSDEGSE DFSGEESEEG EDWDELEKKA
AKADRGNRFA D