SPT16_EMENI
ID SPT16_EMENI Reviewed; 1019 AA.
AC Q5B2X8; C8VEW4;
DT 11-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-NOV-2011, sequence version 2.
DT 25-MAY-2022, entry version 99.
DE RecName: Full=FACT complex subunit spt16;
DE AltName: Full=Facilitates chromatin transcription complex subunit spt16;
GN Name=spt16; ORFNames=AN5102;
OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
OS M139) (Aspergillus nidulans).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Nidulantes.
OX NCBI_TaxID=227321;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139;
RX PubMed=16372000; DOI=10.1038/nature04341;
RA Galagan J.E., Calvo S.E., Cuomo C., Ma L.-J., Wortman J.R., Batzoglou S.,
RA Lee S.-I., Bastuerkmen M., Spevak C.C., Clutterbuck J., Kapitonov V.,
RA Jurka J., Scazzocchio C., Farman M.L., Butler J., Purcell S., Harris S.,
RA Braus G.H., Draht O., Busch S., D'Enfert C., Bouchier C., Goldman G.H.,
RA Bell-Pedersen D., Griffiths-Jones S., Doonan J.H., Yu J., Vienken K.,
RA Pain A., Freitag M., Selker E.U., Archer D.B., Penalva M.A., Oakley B.R.,
RA Momany M., Tanaka T., Kumagai T., Asai K., Machida M., Nierman W.C.,
RA Denning D.W., Caddick M.X., Hynes M., Paoletti M., Fischer R., Miller B.L.,
RA Dyer P.S., Sachs M.S., Osmani S.A., Birren B.W.;
RT "Sequencing of Aspergillus nidulans and comparative analysis with A.
RT fumigatus and A. oryzae.";
RL Nature 438:1105-1115(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139;
RX PubMed=19146970; DOI=10.1016/j.fgb.2008.12.003;
RA Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J.,
RA Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P., von Dohren H.,
RA Doonan J., Driessen A.J., Durek P., Espeso E., Fekete E., Flipphi M.,
RA Estrada C.G., Geysens S., Goldman G., de Groot P.W., Hansen K.,
RA Harris S.D., Heinekamp T., Helmstaedt K., Henrissat B., Hofmann G.,
RA Homan T., Horio T., Horiuchi H., James S., Jones M., Karaffa L.,
RA Karanyi Z., Kato M., Keller N., Kelly D.E., Kiel J.A., Kim J.M.,
RA van der Klei I.J., Klis F.M., Kovalchuk A., Krasevec N., Kubicek C.P.,
RA Liu B., Maccabe A., Meyer V., Mirabito P., Miskei M., Mos M., Mullins J.,
RA Nelson D.R., Nielsen J., Oakley B.R., Osmani S.A., Pakula T., Paszewski A.,
RA Paulsen I., Pilsyk S., Pocsi I., Punt P.J., Ram A.F., Ren Q., Robellet X.,
RA Robson G., Seiboth B., van Solingen P., Specht T., Sun J.,
RA Taheri-Talesh N., Takeshita N., Ussery D., vanKuyk P.A., Visser H.,
RA van de Vondervoort P.J., de Vries R.P., Walton J., Xiang X., Xiong Y.,
RA Zeng A.P., Brandt B.W., Cornell M.J., van den Hondel C.A., Visser J.,
RA Oliver S.G., Turner G.;
RT "The 2008 update of the Aspergillus nidulans genome annotation: a community
RT effort.";
RL Fungal Genet. Biol. 46:S2-13(2009).
CC -!- FUNCTION: Component of the FACT complex, a general chromatin factor
CC that acts to reorganize nucleosomes. The FACT complex is involved in
CC multiple processes that require DNA as a template such as mRNA
CC elongation, DNA replication and DNA repair. During transcription
CC elongation the FACT complex acts as a histone chaperone that both
CC destabilizes and restores nucleosomal structure. It facilitates the
CC passage of RNA polymerase II and transcription by promoting the
CC dissociation of one histone H2A-H2B dimer from the nucleosome, then
CC subsequently promotes the reestablishment of the nucleosome following
CC the passage of RNA polymerase II (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Forms a stable heterodimer with pob3. The spt16-pob3 dimer
CC weakly associates with multiple molecules of nhp6 to form the FACT
CC complex (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Chromosome {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the peptidase M24 family. SPT16 subfamily.
CC {ECO:0000305}.
CC -!- CAUTION: Although related to the peptidase M24 family, this protein
CC lacks conserved active site residues suggesting that it may lack
CC peptidase activity. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=EAA62283.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AACD01000088; EAA62283.1; ALT_SEQ; Genomic_DNA.
DR EMBL; BN001305; CBF80864.1; -; Genomic_DNA.
DR RefSeq; XP_662706.1; XM_657614.1.
DR AlphaFoldDB; Q5B2X8; -.
DR SMR; Q5B2X8; -.
DR STRING; 162425.CADANIAP00003086; -.
DR PRIDE; Q5B2X8; -.
DR EnsemblFungi; CBF80864; CBF80864; ANIA_05102.
DR EnsemblFungi; EAA62283; EAA62283; AN5102.2.
DR GeneID; 2871397; -.
DR KEGG; ani:AN5102.2; -.
DR VEuPathDB; FungiDB:AN5102; -.
DR eggNOG; KOG1189; Eukaryota.
DR HOGENOM; CLU_004627_1_0_1; -.
DR InParanoid; Q5B2X8; -.
DR OMA; HQFFLDG; -.
DR OrthoDB; 145488at2759; -.
DR Proteomes; UP000000560; Chromosome V.
DR Proteomes; UP000005890; Unassembled WGS sequence.
DR GO; GO:0035101; C:FACT complex; IBA:GO_Central.
DR GO; GO:0031491; F:nucleosome binding; IBA:GO_Central.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0034724; P:DNA replication-independent chromatin organization; IBA:GO_Central.
DR GO; GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR CDD; cd01091; CDC68-like; 1.
DR Gene3D; 2.30.29.30; -; 1.
DR Gene3D; 3.40.350.10; -; 1.
DR Gene3D; 3.90.230.10; -; 1.
DR InterPro; IPR029149; Creatin/AminoP/Spt16_NTD.
DR InterPro; IPR036005; Creatinase/aminopeptidase-like.
DR InterPro; IPR013719; DUF1747.
DR InterPro; IPR029148; FACT-Spt16_Nlobe.
DR InterPro; IPR013953; FACT_Spt16.
DR InterPro; IPR000994; Pept_M24.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR040258; Spt16.
DR InterPro; IPR033825; Spt16_M24.
DR PANTHER; PTHR13980; PTHR13980; 1.
DR Pfam; PF14826; FACT-Spt16_Nlob; 1.
DR Pfam; PF00557; Peptidase_M24; 1.
DR Pfam; PF08512; Rtt106; 1.
DR Pfam; PF08644; SPT16; 1.
DR SMART; SM01285; FACT-Spt16_Nlob; 1.
DR SMART; SM01287; Rtt106; 1.
DR SMART; SM01286; SPT16; 1.
DR SUPFAM; SSF55920; SSF55920; 1.
PE 3: Inferred from homology;
KW Chromosome; Coiled coil; DNA damage; DNA repair; DNA replication; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..1019
FT /note="FACT complex subunit spt16"
FT /id="PRO_0000245185"
FT REGION 443..498
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 755..774
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 936..1019
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 477..501
FT /evidence="ECO:0000255"
FT COILED 625..651
FT /evidence="ECO:0000255"
FT COILED 775..798
FT /evidence="ECO:0000255"
FT COMPBIAS 444..459
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 468..498
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 939..992
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 993..1019
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1019 AA; 115311 MW; 2BE134B5998A2314 CRC64;
MGDEIVIDKT AFFNRLSSFY AAWKADKRST NSVFGGAGSI IILMGKTDEA NSYQKNNAIH
FWLLGYEFPA TLFVFTPEVM YVVTTAKKAK HLEPLKGGKI PVEILVTTKD QEEKTRLFEK
CVDIIKSAGN KVGILPRDTT TGPFVEDWKR VYGKISGDVE EVDISPALSA ACFSVKDTDE
LVSIRNASRA CSGLMSDYFV DEMSRLLDEE KQMTHKALSM RIDAKIDDAK FFNKLAKLPS
EFDPQQIDWA YGPVIQSGGK YDLKLTAVSD DNNLEPGIII AGFGIRYKTY SSIIGRTYLV
DPTKSQEANY SLLLSVHEAV LKEARDGVVA KELYNKAIGI VRARKPELES HFVKNVGAGI
GIELRDSNMI LNGKNTRVLK SGMTFSITVG LVDVEEPSVK DKKKNVYSMM ITDTVRVGEQ
GPHVFTKDAG IDMDSVSFYF GDEEEPQKPA KEKKETKSSA IASRNVTRTK LRAERPTQVN
EGAEARRREH QKELAAKKTK EGLDRFAGTT GDDNGVTQKK FKRFESYKRD NQLPAKVKDL
TVYVDHKAST VIVPVMGRPV PFHINTIKNA SKSDEGEYAY LRINFLSPGQ GVGRKDDQPF
EDLSAHFLRN LTLRSKDNDR FAQVAQDITE LRKNALRREQ EKKEMEDVVE QDKLVEIRNR
RPVKLPDVYL RPPLDGKRVP GEVEIHQNGL RYVSPFRNEH VDVLFSNVKH LFFQPCAHEL
IVLIHVHLKT PIMIGKRKTR DIQFYREATE MQFDETGNRR RKHRYGDEEE FEAEQEERRR
RAALDREFKA FAEKIADAGK DEGVDVDIPF REIGFTGVPN RSNVLIQPTT DALVQLTEPP
FLVISLNEIE IAHLERVQFG LKNFDLVFVF KDFHRAPVHI NTIPVENLEG VKDWLDSVDI
AYTEGPLNLN WTTIMKTVVS DPYGFFADGG WSFLAAESDS EDGSDEEEES AFELSESELA
ADESSEEDSD YDDDASADDD FSADEDESGE DWDELEHQAK KKDRESGLDD EDRGKKRKR