SPT16_USTMA
ID SPT16_USTMA Reviewed; 1032 AA.
AC Q4P2U5; A0A0D1DVT3;
DT 11-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2005, sequence version 1.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=FACT complex subunit SPT16;
DE AltName: Full=Facilitates chromatin transcription complex subunit SPT16;
GN Name=SPT16; ORFNames=UMAG_05568;
OS Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
OX NCBI_TaxID=237631;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=521 / FGSC 9021;
RX PubMed=17080091; DOI=10.1038/nature05248;
RA Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J.,
RA Banuett F., Kronstad J.W., Gold S.E., Mueller O., Perlin M.H.,
RA Woesten H.A.B., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G.,
RA Snetselaar K., McCann M., Perez-Martin J., Feldbruegge M., Basse C.W.,
RA Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M.L.,
RA Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L.,
RA Schirawski J., Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N.,
RA Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B.,
RA Meng S., Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J.,
RA Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P.,
RA Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G.,
RA Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A.,
RA Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., Muensterkoetter M.,
RA Haase D., Oesterheld M., Mewes H.-W., Mauceli E.W., DeCaprio D., Wade C.M.,
RA Butler J., Young S.K., Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E.,
RA Birren B.W.;
RT "Insights from the genome of the biotrophic fungal plant pathogen Ustilago
RT maydis.";
RL Nature 444:97-101(2006).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=521 / FGSC 9021;
RA Gueldener U., Muensterkoetter M., Walter M.C., Mannhaupt G., Kahmann R.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the FACT complex, a general chromatin factor
CC that acts to reorganize nucleosomes. The FACT complex is involved in
CC multiple processes that require DNA as a template such as mRNA
CC elongation, DNA replication and DNA repair. During transcription
CC elongation the FACT complex acts as a histone chaperone that both
CC destabilizes and restores nucleosomal structure. It facilitates the
CC passage of RNA polymerase II and transcription by promoting the
CC dissociation of one histone H2A-H2B dimer from the nucleosome, then
CC subsequently promotes the reestablishment of the nucleosome following
CC the passage of RNA polymerase II (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Forms a stable heterodimer with POB3. The SPT16-POB3 dimer
CC weakly associates with multiple molecules of NHP6 to form the FACT
CC complex (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Chromosome {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the peptidase M24 family. SPT16 subfamily.
CC {ECO:0000305}.
CC -!- CAUTION: Although related to the peptidase M24 family, this protein
CC lacks conserved active site residues suggesting that it may lack
CC peptidase activity. {ECO:0000305}.
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DR EMBL; CM003157; KIS66580.1; -; Genomic_DNA.
DR RefSeq; XP_011391874.1; XM_011393572.1.
DR AlphaFoldDB; Q4P2U5; -.
DR SMR; Q4P2U5; -.
DR STRING; 5270.UM05568P0; -.
DR PRIDE; Q4P2U5; -.
DR EnsemblFungi; KIS66580; KIS66580; UMAG_05568.
DR GeneID; 23565423; -.
DR KEGG; uma:UMAG_05568; -.
DR VEuPathDB; FungiDB:UMAG_05568; -.
DR eggNOG; KOG1189; Eukaryota.
DR HOGENOM; CLU_004627_1_0_1; -.
DR InParanoid; Q4P2U5; -.
DR OMA; HQFFLDG; -.
DR OrthoDB; 145488at2759; -.
DR Proteomes; UP000000561; Chromosome 18.
DR GO; GO:0035101; C:FACT complex; IBA:GO_Central.
DR GO; GO:0031491; F:nucleosome binding; IBA:GO_Central.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0034724; P:DNA replication-independent chromatin organization; IBA:GO_Central.
DR GO; GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR Gene3D; 2.30.29.30; -; 1.
DR Gene3D; 3.40.350.10; -; 1.
DR Gene3D; 3.90.230.10; -; 1.
DR InterPro; IPR029149; Creatin/AminoP/Spt16_NTD.
DR InterPro; IPR036005; Creatinase/aminopeptidase-like.
DR InterPro; IPR013719; DUF1747.
DR InterPro; IPR029148; FACT-Spt16_Nlobe.
DR InterPro; IPR013953; FACT_Spt16.
DR InterPro; IPR000994; Pept_M24.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR040258; Spt16.
DR PANTHER; PTHR13980; PTHR13980; 1.
DR Pfam; PF14826; FACT-Spt16_Nlob; 1.
DR Pfam; PF00557; Peptidase_M24; 1.
DR Pfam; PF08512; Rtt106; 1.
DR Pfam; PF08644; SPT16; 1.
DR SMART; SM01285; FACT-Spt16_Nlob; 1.
DR SMART; SM01287; Rtt106; 1.
DR SMART; SM01286; SPT16; 1.
DR SUPFAM; SSF55920; SSF55920; 1.
PE 3: Inferred from homology;
KW Chromosome; Coiled coil; DNA damage; DNA repair; DNA replication; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..1032
FT /note="FACT complex subunit SPT16"
FT /id="PRO_0000245189"
FT REGION 443..485
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 936..1032
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 633..653
FT /evidence="ECO:0000255"
FT COILED 778..803
FT /evidence="ECO:0000255"
FT COILED 996..1017
FT /evidence="ECO:0000255"
FT COMPBIAS 953..998
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 999..1032
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1032 AA; 116222 MW; 1144EC811A7AB63C CRC64;
MSEQIQIDTG AFQRRVNKLL SCWKDSSADF EQLNQVDSLL VVMGGQNDDL IYSKTTAIHS
WLLGYEFPST VILFTKDSVT FVTSASKAVH LEPLKRSSTG FNLEILKRSK DEASNRALWD
DLVSRIDAQG SKVGCLPKDK PIGKFADEWQ SVFEKAQSSK DFKMIDVSAS LSAVWATKDD
DEIKAIRYAS KMSSAVMSGY FENEMSTILD EGKKVTHEQL SERIEGKLDD TKLWKRVKGL
EGADLSLADW CYTPIVQSGG EYDLKTSAVS STKRLQGADG NGGVVIASMG IKYRNYCSNI
GRTYLIDPHN SQQKMYAFLH EIQTQLADKH LRAGATCKEI YSKAVEIVRA KDEKLVASFV
KNVGFGIGLE FRDSAYVLSA KNNRALQRDM VVNLSVGFQD LDDPNHKGEV YSLLLIDTLR
INDNAPATFL TDRVRGTNDM SFFFKDDEEE EEEEERRSPA KPDGKVTPGG KVLRNKNRGA
AHDDTAAEKM KLHQKELAKQ KQEDGLARFA GEDGEGNASN EKVFKKFESY KRENLLPTKV
ADLKIMVDHR AQSIILPIYG YAVPFHINTL KNVSKSDEGE YTYLRLNFVT PGQIAGKKED
VPFDDPDATF VRSMSYRSSD SSRFTELFRE ITELRKSATK REAEEKELAD VVEQDKLILT
KSRAYTLPEV FPRPAMEGKR VPGDLTIHQN GLRFSSPLRP DQKIDLLFSN MKHLFFQPCD
KELIVIVHIH LKSPIMIGKR KAKDIQFYRE ASDVQFDETG NRKRKYRSGD EDEIELEQEE
RRRRSQLNKE FKVFAERIAE ASEGRVSVDV PYRELGFNGV PFRTNVLLQP TTDCLVHLTD
PPFLVITLTD VEIVHLERVQ FGLQSFDMVF VFSDFSRAPM HVTSIPTTSL DDVKQWLDSV
DICVTEGAVN LNWGAIMKTV NEDPYDFFAE GGWGFLQSGS DDGGSSESES GSEFGSEMDD
GQEETDEDSD SGSDFGDSAE DESGSEGFED ESEEGEDWDE LERKAARADE KKRRQQGGSD
DDEDSGKKGK RR