SPX6_ORYSJ
ID SPX6_ORYSJ Reviewed; 234 AA.
AC Q8H398; C7J4Z2; W8QDN4;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 06-JUL-2016, sequence version 2.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=SPX domain-containing protein 6 {ECO:0000303|PubMed:24368504};
DE AltName: Full=Protein SPX DOMAIN GENE 6 {ECO:0000303|PubMed:24368504};
DE Short=OsSPX6 {ECO:0000303|PubMed:24368504};
GN Name=SPX6 {ECO:0000303|PubMed:24368504}; OrderedLocusNames=Os07g0614700;
GN ORFNames=OsJ_25123, P0616D06.120;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=24368504; DOI=10.1093/jxb/ert424;
RA Shi J., Hu H., Zhang K., Zhang W., Yu Y., Wu Z., Wu P.;
RT "The paralogous SPX3 and SPX5 genes redundantly modulate Pi homeostasis in
RT rice.";
RL J. Exp. Bot. 65:859-870(2014).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP TISSUE SPECIFICITY.
RX PubMed=19566645; DOI=10.1111/j.1744-7909.2009.00834.x;
RA Wang Z., Hu H., Huang H., Duan K., Wu Z., Wu P.;
RT "Regulation of OsSPX1 and OsSPX3 on expression of OsSPX domain genes and
RT Pi-starvation signaling in rice.";
RL J. Integr. Plant Biol. 51:663-674(2009).
RN [7]
RP GENE FAMILY, NOMENCLATURE, AND INDUCTION BY COLD.
RX PubMed=19508276; DOI=10.1111/j.1467-7652.2009.00423.x;
RA Zhao L., Liu F., Xu W., Di C., Zhou S., Xue Y., Yu J., Su Z.;
RT "Increased expression of OsSPX1 enhances cold/subfreezing tolerance in
RT tobacco and Arabidopsis thaliana.";
RL Plant Biotechnol. J. 7:550-561(2009).
CC -!- FUNCTION: May be involved in maintaining cellular Pi homeostasis when
CC plants are exposed to an external change in Pi.
CC {ECO:0000250|UniProtKB:Q7Y0F6}.
CC -!- TISSUE SPECIFICITY: Predominantly expressed in roots and leaves.
CC {ECO:0000269|PubMed:19566645}.
CC -!- INDUCTION: Up-regulated during cold stress.
CC {ECO:0000269|PubMed:19508276}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAC16501.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAH94025.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EAZ40652.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; KF267998; AHL42467.2; -; mRNA.
DR EMBL; AP005198; BAC16501.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008213; BAH94025.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014963; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM000144; EAZ40652.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; XP_015645554.1; XM_015790068.1.
DR AlphaFoldDB; Q8H398; -.
DR SMR; Q8H398; -.
DR STRING; 4530.OS07T0614700-01; -.
DR PRIDE; Q8H398; -.
DR EnsemblPlants; Os07t0614700-02; Os07t0614700-02; Os07g0614700.
DR GeneID; 9271158; -.
DR Gramene; Os07t0614700-02; Os07t0614700-02; Os07g0614700.
DR KEGG; osa:9271158; -.
DR eggNOG; KOG1161; Eukaryota.
DR InParanoid; Q8H398; -.
DR OrthoDB; 1345784at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000007752; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR ExpressionAtlas; Q8H398; baseline and differential.
DR GO; GO:0070417; P:cellular response to cold; IEP:UniProtKB.
DR GO; GO:0016036; P:cellular response to phosphate starvation; IEA:InterPro.
DR InterPro; IPR004331; SPX_dom.
DR InterPro; IPR031142; SPX_prot.
DR PANTHER; PTHR45978; PTHR45978; 1.
DR Pfam; PF03105; SPX; 2.
DR PROSITE; PS51382; SPX; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..234
FT /note="SPX domain-containing protein 6"
FT /id="PRO_0000398357"
FT DOMAIN 1..137
FT /note="SPX"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00714"
FT REGION 202..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 234 AA; 25960 MW; 4E67C640029B0C1F CRC64;
MKFGKLLKRQ IEQSLPEWRD KFVSYKELKR IVASISGSPA DEAAFVAALA ADIDKIDSFF
LEQEEEFVIR HRELQEAIKK AAEAAAEVAG IRREIVDFHG EMVLLLSYSS INYIGVGKIL
KKHDKRTGGA LAAPVAEAVR ERRHFFKTET VSRMVRECEA MMAEAAVLPA EAAPEALAAA
AEHGIFRNTV AALLTMEDVR RGSSTHGRHS LPPLTLPDSD WLRSFQPPSP IPIQ
