SPXM2_ORYSJ
ID SPXM2_ORYSJ Reviewed; 696 AA.
AC Q0JAW2; A0A0N7KJJ4; B7EBQ8; Q7XTZ1;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 13-OCT-2009, sequence version 2.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=SPX domain-containing membrane protein Os04g0573000;
GN OrderedLocusNames=Os04g0573000, LOC_Os04g48390;
GN ORFNames=OsJ_15847, OSJNBa0019K04.6;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the major facilitator superfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAD41659.3; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EAZ31698.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL606640; CAD41659.3; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008210; BAF15525.2; -; Genomic_DNA.
DR EMBL; AP014960; BAS90585.1; -; Genomic_DNA.
DR EMBL; CM000141; EAZ31698.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AK066068; BAG89805.1; -; mRNA.
DR RefSeq; XP_015633588.1; XM_015778102.1.
DR RefSeq; XP_015633589.1; XM_015778103.1.
DR RefSeq; XP_015633590.1; XM_015778104.1.
DR AlphaFoldDB; Q0JAW2; -.
DR STRING; 4530.OS04T0573000-01; -.
DR PaxDb; Q0JAW2; -.
DR PRIDE; Q0JAW2; -.
DR EnsemblPlants; Os04t0573000-01; Os04t0573000-01; Os04g0573000.
DR GeneID; 4336724; -.
DR Gramene; Os04t0573000-01; Os04t0573000-01; Os04g0573000.
DR KEGG; osa:4336724; -.
DR eggNOG; KOG1161; Eukaryota.
DR eggNOG; KOG2325; Eukaryota.
DR HOGENOM; CLU_025236_1_0_1; -.
DR InParanoid; Q0JAW2; -.
DR OMA; NMYVMMG; -.
DR OrthoDB; 345163at2759; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000007752; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR Genevisible; Q0JAW2; OS.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR CDD; cd14479; SPX-MFS_plant; 1.
DR Gene3D; 1.20.1250.20; -; 1.
DR InterPro; IPR011701; MFS.
DR InterPro; IPR036259; MFS_trans_sf.
DR InterPro; IPR004331; SPX_dom.
DR InterPro; IPR045264; SPXM_SPX_plant.
DR Pfam; PF07690; MFS_1; 1.
DR Pfam; PF03105; SPX; 1.
DR SUPFAM; SSF103473; SSF103473; 1.
DR PROSITE; PS51382; SPX; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..696
FT /note="SPX domain-containing membrane protein Os04g0573000"
FT /id="PRO_0000398573"
FT TRANSMEM 247..267
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 278..298
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 315..335
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 338..357
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 375..395
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 411..431
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 512..532
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 543..563
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 575..595
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 603..623
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 669..689
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 2..145
FT /note="SPX"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00714"
FT REGION 470..494
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 696 AA; 77531 MW; 1640D655D1A13D9F CRC64;
MVNFGKKLMA DQVEEWKGYY INYKLMKKML KQYVQQTQLG GKDREQVLKE FSRILDEQIE
RIVLFLLQQQ GHLANRIEEL GEQRAALLEQ HDISQVFQLR EAYREVGRDL IKLLRFVDMN
ATGIRKILKK FDKRFGYRFT DYYVTTRANH PYSQLQQVFK QVGIVAVVGA LSRNLAYLQD
HEGSVLSIYD HPSVTLKDPI IDQVNHAVQK LTHATSFLQF LGQHALIIQE DVQSGSEDLV
DDQSYHFMSL ILNLVNTFLY MVNTYIIVPT ADDYAVSLGA AATVCGVIIG SMAVAQVFSS
VYFSAWSNRS YFRPLVFSSI MLFAGNLLYA LAYDLNSLTV LLIGRLLCGL GSARAVNRRY
ISDCVPLKIR LQASAGFVSA SALGMACGPA LAGLLQTRFK IYSLTFDQST LPGWVMCIAW
LVYLLWLWIS FKEPGHFAKS SDTAQPAESG HQVNANLEEG LAQPLLTGSE EGQDQNAEDN
DDNEEESKNS HGPATSISSA YKLLTPSVKV QLLIYFMLKY AMEILLSESS VITTYYFNWS
TSAVAIFLAI LGCTVLPVNA IVGSYITNLF EDRQILVASE IMVLIGIIMS FRYTPHYSVP
QYVLSALITF VFAEVLEGVN LSLLSRVMSS RLARGTYNGG LLSTEAGTLA RVVADATITA
AGYLGPDLLL NITLLPPLVI CIASLVATFC TYNTLY
