ID   SR43C_ORYSJ             Reviewed;         388 AA.
AC   Q8LSQ2; A3ADT6; B9FAX9; Q0DVF8; Q10S73;
DT   30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2002, sequence version 1.
DT   25-MAY-2022, entry version 120.
DE   RecName: Full=Probable signal recognition particle 43 kDa protein, chloroplastic;
DE   Flags: Precursor;
GN   OrderedLocusNames=Os03g0131900, LOC_Os03g03990;
GN   ORFNames=OJ1004C08.7, OsJ_09298;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16109971; DOI=10.1101/gr.3869505;
RG   The rice chromosome 3 sequencing consortium;
RA   Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA   Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA   Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA   Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA   Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA   Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA   Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA   Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA   Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA   Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA   O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA   Jin W., Lee H.R., Jiang J., Jackson S.;
RT   "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT   and diverged grass species.";
RL   Genome Res. 15:1284-1291(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 6-388.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Component of the chloroplast signal recognition particle
CC       pathway. Targets proteins into the thylakoid membrane (By similarity).
CC       {ECO:0000250}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAF10780.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=EEE58279.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AC098693; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; DP000009; ABF93821.1; -; Genomic_DNA.
DR   EMBL; AP008209; BAF10780.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP014959; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CM000140; EEE58279.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AK099900; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015629751.1; XM_015774265.1.
DR   AlphaFoldDB; Q8LSQ2; -.
DR   SMR; Q8LSQ2; -.
DR   STRING; 4530.OS03T0131900-01; -.
DR   PaxDb; Q8LSQ2; -.
DR   EnsemblPlants; Os03t0131900-01; Os03t0131900-01; Os03g0131900.
DR   GeneID; 4331514; -.
DR   Gramene; Os03t0131900-01; Os03t0131900-01; Os03g0131900.
DR   KEGG; osa:4331514; -.
DR   eggNOG; KOG0504; Eukaryota.
DR   HOGENOM; CLU_712464_0_0_1; -.
DR   InParanoid; Q8LSQ2; -.
DR   OrthoDB; 683197at2759; -.
DR   Proteomes; UP000000763; Chromosome 3.
DR   Proteomes; UP000007752; Chromosome 3.
DR   Proteomes; UP000059680; Chromosome 3.
DR   Genevisible; Q8LSQ2; OS.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR   GO; GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
DR   GO; GO:0097718; F:disordered domain specific binding; IEA:EnsemblPlants.
DR   GO; GO:0042802; F:identical protein binding; IEA:EnsemblPlants.
DR   GO; GO:0030674; F:protein-macromolecule adaptor activity; IEA:EnsemblPlants.
DR   GO; GO:0070208; P:protein heterotrimerization; IEA:EnsemblPlants.
DR   GO; GO:0009644; P:response to high light intensity; IEA:EnsemblPlants.
DR   Gene3D; 1.25.40.20; -; 1.
DR   InterPro; IPR002110; Ankyrin_rpt.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR016197; Chromo-like_dom_sf.
DR   InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR   InterPro; IPR023780; Chromo_domain.
DR   Pfam; PF13637; Ank_4; 1.
DR   Pfam; PF00385; Chromo; 1.
DR   SMART; SM00248; ANK; 3.
DR   SMART; SM00298; CHROMO; 3.
DR   SUPFAM; SSF48403; SSF48403; 1.
DR   SUPFAM; SSF54160; SSF54160; 3.
DR   PROSITE; PS50297; ANK_REP_REGION; 1.
DR   PROSITE; PS50088; ANK_REPEAT; 2.
DR   PROSITE; PS50013; CHROMO_2; 1.
PE   2: Evidence at transcript level;
KW   ANK repeat; Chloroplast; Plastid; Reference proteome; Repeat;
KW   Ribonucleoprotein; Signal recognition particle; Transit peptide.
FT   TRANSIT         1..42
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000255"
FT   CHAIN           43..388
FT                   /note="Probable signal recognition particle 43 kDa protein,
FT                   chloroplastic"
FT                   /id="PRO_0000238462"
FT   DOMAIN          68..137
FT                   /note="Chromo 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00053"
FT   REPEAT          123..158
FT                   /note="ANK 1"
FT   REPEAT          159..188
FT                   /note="ANK 2"
FT   REPEAT          194..223
FT                   /note="ANK 3"
FT   DOMAIN          271..332
FT                   /note="Chromo 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00053"
FT   DOMAIN          321..379
FT                   /note="Chromo 3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00053"
FT   REGION          1..24
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          46..66
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   388 AA;  42139 MW;  5A1DD3DBBEE1C79E CRC64;
     MEAVLRHPSL SRLKPPNPNA QRTPALSITV PFRLRLPNRR LTAAAVFQDQ TNPRNPASKG
     GDDDEAYGEV DRIVSSRTIK NPVFAEDGSA TTVTATEYLV EWKDGHEPSW IPAEAIAADV
     VAEYETPWWT AAKKADAAEI TALLADETLR RDPDAEDAQG RTAMHFAAGL GSEECVRALA
     EAGADVGRPE RAGGGLTPLH IAVGYGRPAA VRALLELGAE PEAPDGQGRT PLELVQDVLA
     KTPKGNPATF ERRLALEAAA KELEKAVYEW GEVEKVVDGR GEGKWREYLV EWRDGGDREW
     VRAAWVAEDL VKDFDAGLEY AVAEAVVNKR EAAEGEGKWE YLVKWVDIEE ATWEPAENVD
     AELLQEFEQR QSGVAAGGDA PPPPPVAG