SRB8_COCIM
ID SRB8_COCIM Reviewed; 1554 AA.
AC Q1EAK2; J3KGZ4;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2013, sequence version 2.
DT 25-MAY-2022, entry version 67.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 12;
DE AltName: Full=Mediator complex subunit 12;
GN Name=SRB8; Synonyms=MED12; ORFNames=CIMG_00411;
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=RS;
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
CC -!- FUNCTION: Component of the SRB8-11 complex. The SRB8-11 complex is a
CC regulatory module of the Mediator complex which is itself involved in
CC regulation of basal and activated RNA polymerase II-dependent
CC transcription. The SRB8-11 complex may be involved in the
CC transcriptional repression of a subset of genes regulated by Mediator.
CC It may inhibit the association of the Mediator complex with RNA
CC polymerase II to form the holoenzyme complex (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Component of the SRB8-11 complex, which itself associates with
CC the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 12 family.
CC {ECO:0000305}.
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DR EMBL; GG704911; EAS35057.3; -; Genomic_DNA.
DR RefSeq; XP_001246640.2; XM_001246639.2.
DR AlphaFoldDB; Q1EAK2; -.
DR STRING; 246410.Q1EAK2; -.
DR EnsemblFungi; EAS35057; EAS35057; CIMG_00411.
DR GeneID; 4566041; -.
DR KEGG; cim:CIMG_00411; -.
DR VEuPathDB; FungiDB:CIMG_00411; -.
DR InParanoid; Q1EAK2; -.
DR OMA; DNKREAW; -.
DR OrthoDB; 285540at2759; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0016592; C:mediator complex; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR InterPro; IPR019035; Mediator_Med12.
DR Pfam; PF09497; Med12; 1.
DR SMART; SM01281; Med12; 1.
PE 3: Inferred from homology;
KW Activator; Nucleus; Reference proteome; Repressor; Transcription;
KW Transcription regulation.
FT CHAIN 1..1554
FT /note="Mediator of RNA polymerase II transcription subunit
FT 12"
FT /id="PRO_0000312970"
FT REGION 1..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 128..173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..64
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1554 AA; 173384 MW; 6AECEE47B5A10735 CRC64;
MASLNTPECP VMSSRPSMSC GNSSSSGLAI QGHSQRPSQT DPSAVEQAAQ DSVIDLTNSD
YETCDANRAT KRQKLDLRID VPNTQRAPKA RFSQAVSSPF ALQDTVPPIR TGRPFWDFGE
EVSGFGFQGS LESEIPNDEP EQPDSLPPLP VRPWRYRPQG HSSREETPRV NQNAGAEVQT
TPFCIEVPEA APIFDSGKPL DFYPWKGDHP EDSLTDQTAK QGYYDRVQVS QNESNTARPS
LYVQLKHRSG LKLLSSVFTA AIDKRQSHCR VTGFSTFKPP PRVTLTDIKR ETWLRDLANP
SVPLRRLSRT IPHGIRGRIL LDQCVNKAIP IGRAVWLVKC VGANEIRAFK RKGTSAAITH
SLEVKWVRDW SINVHQFIES VVTACGTPNW ASTMSYVIRF AARLFQEQLL DQALCLDWFL
QSLRTAPIGT LPIWLSMLGA YWTSLVRYRK RGRPLAESLL EKLKTILSLE DSGPKKQIAD
RLSWLIKTFA ESHPACFVLP LTWRTYKSTL TTCFCLHLSE DNRKIGALSN RNERIVKAEI
CRQSGRQSPS QQVICLLDSA DSLNDMEILS SGCLNLHFDH GSLIMKILEW VSTSFRRGSA
RVYVAVRLLR KWRRAGMDTD NCIVNFLQQK ADTPGFSPAN IYHLVCELVR SQSFAVGKYL
QWLMARGAVR NDAPMHPTVQ LLAHLPRRKL PSHVWNLRNT LLTKAGFLLS SENQQILNTK
RYIHHRLPEV ITKPIAGDNE GLFTPSDLSN LNWTIKSEIG HWIREHVSLH RKRYLRTAPN
HHNACAIEIS ALTPAQFFEI RDIIECLGDL SLLADILKHT SSSDNIIVLI SAVDTLNYCA
DSFKAIGALS DLFKSALAGY AHVNKADVSI IELISSLLEV GMKLPGEIPV VAMLRRDLSH
FDKKFTGAVS SPVSDHTGES VNIASPAFSE GLHQLLNSGS GMDEPNMNKI FDMLSRKLKQ
SKEPNASSHE IARHLSQLRV LNSDVFDRLM VKWIISTLKS SPRPHLLTFL PPLIGVGCVT
FEAFFALIDR LLKSDSHRQS IQDVSGLRYE MINLLRKEIF YELGSIDLVS YRFKTTREEY
ITHHAYDALG LVNEALANVN PESTSNPPLV PLLCELIIQN LNAFGPEGAG RIVEEFPNCV
DIIHQALDVL LGLKAQVGVQ KTQSVVGLID DLSLSYCLVK LRLLLDANPD GDAARSSIVD
LLFRTAESDI RNGERRWLEV LNVLPVSAAH LIRQRAEREI LSLSLISSSL TTFSSEEDAL
IYLCIVEELS YSIPDEFSPS SMGADLGDKM FLLLQKTVEL ANAKKGTDLE SGASSTALGV
AELSIGVWFF VLLRLVALHR SLVPPNCDSR TEINHQTRLL VQICCISRSP LFARRSTQSF
ISSISTFTKC DSLLRMLPSS WANLQLQALD VCSTLVDTLS DEARYECARF LRDKCPAFLH
PQNDARLLFL FGPIIESQSI TTHGSSRAST STPVTNLTQH VQSTPPPSQN TLTPGMVEEP
NLFTNKLRFQ QNGRITGPYP PKPWEMLGDA APIIGINDTP VNLAYFGTRQ SKRL