SRFB1_XENTR
ID SRFB1_XENTR Reviewed; 535 AA.
AC Q5XGC9; Q28EI0;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 61.
DE RecName: Full=Serum response factor-binding protein 1;
DE AltName: Full=SRF-dependent transcription regulation-associated protein;
GN Name=srfbp1 {ECO:0000312|EMBL:AAH84513.1}; ORFNames=TTpA001g14.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1] {ECO:0000312|EMBL:CAJ82958.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC TISSUE=Tadpole {ECO:0000312|EMBL:CAJ82958.1};
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000312|EMBL:CAJ82958.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC TISSUE=Embryo {ECO:0000312|EMBL:AAH84513.1};
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May be involved in regulating transcriptional activation of
CC cardiac genes during the aging process. May play a role in biosynthesis
CC and/or processing of SLC2A4 in adipose cells (By similarity).
CC {ECO:0000250|UniProtKB:Q9CZ91}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, perinuclear region
CC {ECO:0000250|UniProtKB:Q9CZ91}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q5XGC9-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q5XGC9-2; Sequence=VSP_031567;
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DR EMBL; CR848244; CAJ82958.1; -; mRNA.
DR EMBL; BC084513; AAH84513.1; -; mRNA.
DR RefSeq; NP_001011115.1; NM_001011115.1. [Q5XGC9-1]
DR AlphaFoldDB; Q5XGC9; -.
DR SMR; Q5XGC9; -.
DR GeneID; 496528; -.
DR KEGG; xtr:496528; -.
DR CTD; 153443; -.
DR Xenbase; XB-GENE-941165; srfbp1.
DR InParanoid; Q5XGC9; -.
DR OrthoDB; 1397283at2759; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0030686; C:90S preribosome; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0030490; P:maturation of SSU-rRNA; IBA:GO_Central.
DR InterPro; IPR037393; Bud22/SRFB1.
DR InterPro; IPR015158; Bud22_dom.
DR PANTHER; PTHR23325; PTHR23325; 1.
DR Pfam; PF09073; BUD22; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Coiled coil; Cytoplasm; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..535
FT /note="Serum response factor-binding protein 1"
FT /id="PRO_0000320010"
FT REGION 128..435
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 453..535
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 5..27
FT /evidence="ECO:0000255"
FT COILED 107..177
FT /evidence="ECO:0000255"
FT COMPBIAS 128..191
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 208..320
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 336..361
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 367..385
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 408..429
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 509..535
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 320..324
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|Ref.1"
FT /id="VSP_031567"
SQ SEQUENCE 535 AA; 61009 MW; 695FCA3AD60308A3 CRC64;
MEPVLNLNNE VVKLRKDVKK VKVLIIRKLT RHIAKLKSKK GTEELILKNQ RRAQRLLEEI
HSVKELKPDD VTKTALRKEI SFEKVCKKPN STAEERALAR LATHPLLKQK ITAIKEAIKA
FKDARKTAAE GEREREKDEP EQVTKIKETK KPVQAKLNKN TEEIKSAKEH VKEEKCKNLL
EDSDKGTEKA LELPYVQENL PEQTAENKEQ PKAQDVERPA VERPAVERPA VERPAVERPA
VERPAVERPA VERPAVERPA VERPAVERPA VERPAVERPA VERPAVERPA VERPAVERPA
VERPAVERPA VERPAVERPA VERPVVESPA VERPPVESPP KKKACLEQEL GCELSDIEDS
DKEKEYFDDS TEERFYKHSS SFEDSDSGSD NDFFIGKIRR TKKKKSDKDG SKQKEEKVPP
TKEKAQTSEV QKEIPTAKSM KLKSVFCKSL SQTKPKPSFT KRETNFRQER NKRPVMPQAS
PLAKKPLQSK ATSVRQPGRK LEAQPLHPSW EASRKRKEQQ AQITKFQGKK IVFDD