SRL2_ORYSJ
ID SRL2_ORYSJ Reviewed; 988 AA.
AC Q10MI0; Q10MH9;
DT 16-OCT-2019, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Protein SEMI-ROLLED LEAF 2 {ECO:0000303|PubMed:26873975};
GN Name=SRL2 {ECO:0000303|PubMed:26873975};
GN OrderedLocusNames=LOC_Os03g19520 {ECO:0000312|EMBL:ABF95547.1},
GN Os03g0308200 {ECO:0000312|EMBL:BAF11817.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=26873975; DOI=10.1093/jxb/erw029;
RA Liu X., Li M., Liu K., Tang D., Sun M., Li Y., Shen Y., Du G., Cheng Z.;
RT "Semi-Rolled Leaf2 modulates rice leaf rolling by regulating abaxial side
RT cell differentiation.";
RL J. Exp. Bot. 67:2139-2150(2016).
CC -!- FUNCTION: Functions in regulating leaf rolling through abaxial side
CC leaf cell differentiation (PubMed:26873975). May be involved in the
CC transdifferentiation process from mesophyll cells to sclerenchymatous
CC cells (PubMed:26873975). {ECO:0000269|PubMed:26873975}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:26873975}. Cytoplasm
CC {ECO:0000269|PubMed:26873975}.
CC -!- TISSUE SPECIFICITY: Expressed in root tips, and in the vascular bundles
CC of leaf blades, leaf sheaths, and roots, especially in their
CC sclerenchymatous cells. {ECO:0000269|PubMed:26873975}.
CC -!- DISRUPTION PHENOTYPE: Inward rolled leaves due to the presence of
CC defective sclerenchymatous cells on the abaxial side of the leaf
CC (PubMed:26873975). Narrow leaves and reduced plant height
CC (PubMed:26873975). {ECO:0000269|PubMed:26873975}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABF95548.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; DP000009; ABF95547.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF95548.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008209; BAF11817.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS83832.1; -; Genomic_DNA.
DR EMBL; AK072741; BAG93123.1; -; mRNA.
DR RefSeq; XP_015632985.1; XM_015777499.1.
DR AlphaFoldDB; Q10MI0; -.
DR STRING; 4530.OS03T0308200-01; -.
DR PaxDb; Q10MI0; -.
DR PRIDE; Q10MI0; -.
DR EnsemblPlants; Os03t0308200-01; Os03t0308200-01; Os03g0308200.
DR GeneID; 4332616; -.
DR Gramene; Os03t0308200-01; Os03t0308200-01; Os03g0308200.
DR eggNOG; KOG1877; Eukaryota.
DR HOGENOM; CLU_006993_1_0_1; -.
DR InParanoid; Q10MI0; -.
DR OMA; DPQIKSD; -.
DR OrthoDB; 138422at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR ExpressionAtlas; Q10MI0; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005886; C:plasma membrane; IEA:EnsemblPlants.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0009555; P:pollen development; IEA:EnsemblPlants.
DR InterPro; IPR016024; ARM-type_fold.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Developmental protein; Differentiation; Nucleus;
KW Reference proteome.
FT CHAIN 1..988
FT /note="Protein SEMI-ROLLED LEAF 2"
FT /id="PRO_0000448357"
FT REGION 844..865
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 988 AA; 110313 MW; 59E13CB99FEE6C8F CRC64;
MGFMSAKLFP SCESMCVCCP ALRPSSRRPV KRYKKLLAEI FPKTPDGLPN ERKIMKLCEY
AAKNPLRIPK IAKFLEQRSH KELRSAHVNF IKIITEAYSK LLFICKEQMA YFAISLVNVL
TELLESKQEN IHILGCQTLA KFIYSQVDNT YARNIESLVR KVCVLSRQQG VEHSLLRAAS
LQCLSAMIWF MKEHSYIFVD FDEIVQSVLE NYRVEESAAG DEERHAPQHN WVDEIVRREG
RAGLGGGNDV NCNSTAIRLR SARDSSALTR EERESPEVWA HICVQKLAEL AKESTTMRRI
LDPMLSYFDK KKQWAPRQGL ALLVLSDMSY LEKSSGNEQL ILTSVIRHLD HKNVLYDPQI
KSDMIQTATL LARQLRSRGI AAELVVAGDL CRHLRKTLEA MESASIEELN LNESLQNFLQ
DCLLEVVTGI NDVRPLYDMM AITLENLPSM PVVARASIGS LLILSHIISL TSMSLNAPML
FPEALLQQIL KSMVHPDVDT RVGAHHMFSA VIVQGPSRQR SESDFLYETK KWQSRTTSVF
ASATALLEKL RREKESLGSD KTGNMDDEKE KSISEEENKH VWARKNSAYF SKLVFSFTDR
YAALTSSAEE ANIVMLTEDQ KNQLLSAFWV QAIQTDNTPF NYEAIGHSYS LTVISSRLKD
SRNSNNIQFF QLPLSLRSVS LTSNGVLSPS CQRSIFTLAT SMLAFAGKVC HITELFDVLR
CFTSCNMDPY LRIGEDLQLY VRLQSDLGNY GSDSDQEIAR SVLSDCRTKV GINDQRVLDV
VACALCNLTE MDKDVLVKEL TEMFTPEEVP LFGSNSAFDW ANFHVQAFSD ESLSFDEECS
RTSSVDGGLH ESPITNTGSS ISKTTMPQSV PRVLGVGQLL ESALHVAGQV AGASVSTSPL
PYGTMTSQCE ALGSGTRKKL SSWLVNGHDS TPDNPAPSLP SAQHFIIPKV NSCGFESSIR
TTLEPCSAVK LPPASPFDNF LKAAYRAQ