SRRTA_XENLA
ID SRRTA_XENLA Reviewed; 849 AA.
AC B1H1X4; A1L1C0;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 1.
DT 03-AUG-2022, entry version 43.
DE RecName: Full=Serrate RNA effector molecule homolog A;
DE AltName: Full=Arsenite-resistance protein 2-A;
GN Name=srrt-a; Synonyms=ars2-a;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney, and Oocyte;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Acts as a mediator between the cap-binding complex (CBC) and
CC the primary microRNAs (miRNAs) processing machinery during cell
CC proliferation. Contributes to the stability and delivery of capped
CC primary miRNA transcripts to the primary miRNA processing complex,
CC thereby playing a role in RNA-mediated gene silencing (RNAi) by miRNAs
CC (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts ncbp1/cbp80. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleoplasm {ECO:0000250}. Cytoplasm
CC {ECO:0000250}. Note=Predominantly nuclear. Shuttles between the nucleus
CC and the cytoplasm (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the ARS2 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAI28977.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};
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DR EMBL; BC128976; AAI28977.1; ALT_SEQ; mRNA.
DR EMBL; BC160771; AAI60771.1; -; mRNA.
DR RefSeq; NP_001116168.1; NM_001122696.1.
DR AlphaFoldDB; B1H1X4; -.
DR SMR; B1H1X4; -.
DR GeneID; 100037061; -.
DR KEGG; xla:100037061; -.
DR CTD; 100037061; -.
DR Xenbase; XB-GENE-6255528; srrt.S.
DR OrthoDB; 525905at2759; -.
DR Proteomes; UP000186698; Chromosome 3S.
DR Bgee; 100037061; Expressed in neurula embryo and 19 other tissues.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR GO; GO:0005654; C:nucleoplasm; ISS:UniProtKB.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR GO; GO:0031053; P:primary miRNA processing; ISS:UniProtKB.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR039727; SE/Ars2.
DR InterPro; IPR007042; SERRATE/Ars2_C.
DR InterPro; IPR021933; SERRATE/Ars2_N.
DR PANTHER; PTHR13165; PTHR13165; 1.
DR Pfam; PF04959; ARS2; 1.
DR Pfam; PF12066; SERRATE_Ars2_N; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Nucleus; Reference proteome; RNA-mediated gene silencing.
FT CHAIN 1..849
FT /note="Serrate RNA effector molecule homolog A"
FT /id="PRO_0000385212"
FT REGION 1..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 276..409
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 276..368
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 381..408
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 849 AA; 98581 MW; 2A4BAABC11AD7501 CRC64;
MADSDDEYDR RRRDKFRRER SDYDRSRERE ERRRDDWSDR EWDRGRERRS RGEYRDYESR
SRRERFSPQR HDLSPPQKRM RRDWDDHGSD PYHSGYDLPY SSSAGGPGYG PPQPWGHPEM
HVLQHHGIPI QARLGNLHQV DLGTPAPIMK TFKEFLLSLE DTVDETEAVK RYNDYKIDFR
RQQMQEFFLA HKDEEWFRSK YHPDEVGKHK QESQASLRNR LSAFMFLMEK SWLNEVQLDI
AQSPAIIKVL DAAVIKMEGG TEIDLKILDE EEEEAKREAA KKEEAPVTET EKVVTEEKEA
PAKPENDKED ESEEKPVKPQ EEEEKKVEKK VEKEEPERET RKPGTRKRKR SGESDDGSDS
ESDTETASPK PKAETPNQNG RAEETPKKEE DTEKQKEKQK EDTVKPRPLH KTCSIFMRNI
PPNISKAEIT ALCKRYPGFM RVALSEPQPE RRFLRKAYVT FDRSVNIKEI CWSVQNIRLR
ECELSPGVNR DLTYRVRNIN GITLHRPIVR NDIKLAARLI HALDERAVLW EGEQMVLAQN
PILKNITDYL IDEVNAEEEE LLFSAGRTPE TELPKDGNPT EISVERDDKL IKVLDKLLFY
LRIVHSVDYY NTCEYPNEDE MPTRCGMMHV RGPLPPNRVS HGEVAEWQKT FEEKLAPLFA
VRETLSEEES IKMGKKDPEQ EVEKFVAANT QELGKEKWLC PLSGKKFKGP EFVRKHIFNK
HAEKIEEVKK EVVFFNNYLI DSKRPALLEV KPLQPPVGAA GQALAAGLLY PHQGPPALLP
YAQPRPPVLG YGGAPQFPPN PYGAGRGNYD AFRGQGMYPG KPRNRMMRGD PRSIIEYRDL
DAPDDVDFF