SSBP3_CHICK
ID SSBP3_CHICK Reviewed; 368 AA.
AC Q98948;
DT 10-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 3.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Single-stranded DNA-binding protein 3;
DE AltName: Full=Sequence-specific single-stranded-DNA-binding protein;
GN Name=SSBP3; Synonyms=SSDP;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND SEQUENCE REVISION TO 123-148.
RA Bayarsaihan D.;
RL Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 78-368.
RC TISSUE=Embryonic fibroblast;
RX PubMed=9531483; DOI=10.1042/bj3310447;
RA Bayarsaihan D., Soto R.J., Lukens L.N.;
RT "Cloning and characterization of a novel sequence-specific single-stranded-
RT DNA-binding protein.";
RL Biochem. J. 331:447-452(1998).
CC -!- FUNCTION: May be involved in transcription regulation of the alpha 2(I)
CC collagen gene where it binds to the single-stranded polypyrimidine
CC sequences in the promoter region.
CC -!- SUBCELLULAR LOCATION: Nucleus.
CC -!- TISSUE SPECIFICITY: Expressed in embryonic fibroblasts and
CC chondrocytes.
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DR EMBL; U68380; AAC60373.2; -; mRNA.
DR RefSeq; NP_989895.1; NM_204564.1.
DR AlphaFoldDB; Q98948; -.
DR SMR; Q98948; -.
DR STRING; 9031.ENSGALP00000017502; -.
DR Ensembl; ENSGALT00000017523; ENSGALP00000017502; ENSGALG00000010774.
DR GeneID; 395250; -.
DR KEGG; gga:395250; -.
DR CTD; 23648; -.
DR VEuPathDB; HostDB:geneid_395250; -.
DR eggNOG; KOG4594; Eukaryota.
DR GeneTree; ENSGT00950000183049; -.
DR InParanoid; Q98948; -.
DR OrthoDB; 907486at2759; -.
DR PhylomeDB; Q98948; -.
DR PRO; PR:Q98948; -.
DR Proteomes; UP000000539; Chromosome 8.
DR Bgee; ENSGALG00000010774; Expressed in granulocyte and 12 other tissues.
DR ExpressionAtlas; Q98948; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR008116; SSDP_DNA-bd.
DR PRINTS; PR01743; SSDNABINDING.
DR SMART; SM00667; LisH; 1.
DR PROSITE; PS50896; LISH; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..368
FT /note="Single-stranded DNA-binding protein 3"
FT /id="PRO_0000123831"
FT DOMAIN 16..48
FT /note="LisH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00126"
FT REGION 100..368
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 110..144
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 161..177
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 228..246
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 263..277
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 323..337
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 352..368
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 368 AA; 38234 MW; 08EA01F3B6A3A64C CRC64;
MFAKGKGSAV PSDGQAREKL ALYVYEYLLH VGAQKSAQTF LSEIRWEKNI TLGEPPGFLH
SWWCVFWDLY CAAPERRDTC EHSSEAKAFH DYSAAAAPSP VLGNIPPNDG MPGGPIPPGF
FQGPPGSQPS PHAQPPPHNP NSMMGPHSQP PGAVPGTQPL LPNSMDPTRQ QGHPNMGGPM
QRMNPPRGMG PMGPGPQNYG SGMRPPPNSL GPGMPGINMG PGAGRPWPNP SSANSIPYSS
SSPGTYVGPP GGGGPPGTPI MPSPADSTNS SDNIYTMINP VPPAGSRSNF PMGPGSDGPM
GGMGGMEPHH MNGSLGSGDI DGLPKNSPNN ISGISNPPGT PRDDGELGGN FLHSFQNDNY
SPSMTMSV