SSK_BOMMO
ID SSK_BOMMO Reviewed; 157 AA.
AC H9JBU5;
DT 05-OCT-2016, integrated into UniProtKB/Swiss-Prot.
DT 05-OCT-2016, sequence version 2.
DT 25-MAY-2022, entry version 32.
DE RecName: Full=Protein snakeskin {ECO:0000250|UniProtKB:Q9VW87};
OS Bombyx mori (Silk moth).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea;
OC Bombycidae; Bombycinae; Bombyx.
OX NCBI_TaxID=7091 {ECO:0000312|Proteomes:UP000005204};
RN [1] {ECO:0000305}
RP NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 2-27, SUBCELLULAR LOCATION,
RP AND TISSUE SPECIFICITY.
RC TISSUE=Midgut {ECO:0000303|PubMed:22328496};
RX PubMed=22328496; DOI=10.1242/jcs.096800;
RA Yanagihashi Y., Usui T., Izumi Y., Yonemura S., Sumida M., Tsukita S.,
RA Uemura T., Furuse M.;
RT "Snakeskin, a membrane protein associated with smooth septate junctions, is
RT required for intestinal barrier function in Drosophila.";
RL J. Cell Sci. 125:1980-1990(2012).
RN [2] {ECO:0000312|Proteomes:UP000005204}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=p50T {ECO:0000312|Proteomes:UP000005204};
RX PubMed=15591204; DOI=10.1126/science.1102210;
RA Xia Q., Zhou Z., Lu C., Cheng D., Dai F., Li B., Zhao P., Zha X., Cheng T.,
RA Chai C., Pan G., Xu J., Liu C., Lin Y., Qian J., Hou Y., Wu Z., Li G.,
RA Pan M., Li C., Shen Y., Lan X., Yuan L., Li T., Xu H., Yang G., Wan Y.,
RA Zhu Y., Yu M., Shen W., Wu D., Xiang Z., Yu J., Wang J., Li R., Shi J.,
RA Li H., Li G., Su J., Wang X., Li G., Zhang Z., Wu Q., Li J., Zhang Q.,
RA Wei N., Xu J., Sun H., Dong L., Liu D., Zhao S., Zhao X., Meng Q., Lan F.,
RA Huang X., Li Y., Fang L., Li C., Li D., Sun Y., Zhang Z., Yang Z.,
RA Huang Y., Xi Y., Qi Q., He D., Huang H., Zhang X., Wang Z., Li W., Cao Y.,
RA Yu Y., Yu H., Li J., Ye J., Chen H., Zhou Y., Liu B., Wang J., Ye J.,
RA Ji H., Li S., Ni P., Zhang J., Zhang Y., Zheng H., Mao B., Wang W., Ye C.,
RA Li S., Wang J., Wong G.K.-S., Yang H.;
RT "A draft sequence for the genome of the domesticated silkworm (Bombyx
RT mori).";
RL Science 306:1937-1940(2004).
CC -!- FUNCTION: Required for assembly of smooth septate junctions (sSJs). May
CC be important for barrier function of the midgut epithelium.
CC {ECO:0000250|UniProtKB:Q9VW87}.
CC -!- SUBCELLULAR LOCATION: Apicolateral cell membrane
CC {ECO:0000269|PubMed:22328496}; Multi-pass membrane protein
CC {ECO:0000255}. Cell junction, septate junction
CC {ECO:0000250|UniProtKB:Q9VW87}. Note=Specific to smooth septate
CC junctions. {ECO:0000250|UniProtKB:Q9VW87}.
CC -!- TISSUE SPECIFICITY: Expressed in midgut epithelium (at protein level).
CC {ECO:0000269|PubMed:22328496}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BABH01015024; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; BABH01015024; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H9JBU5; -.
DR STRING; 7091.BGIBMGA006990-TA; -.
DR eggNOG; ENOG502RZZJ; Eukaryota.
DR HOGENOM; CLU_130085_0_0_1; -.
DR InParanoid; H9JBU5; -.
DR Proteomes; UP000005204; Unassembled WGS sequence.
DR GO; GO:0016327; C:apicolateral plasma membrane; IDA:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005918; C:septate junction; IEA:UniProtKB-SubCell.
DR GO; GO:0019991; P:septate junction assembly; IEA:InterPro.
DR InterPro; IPR038976; Ssk.
DR PANTHER; PTHR36692; PTHR36692; 1.
PE 1: Evidence at protein level;
KW Cell junction; Cell membrane; Direct protein sequencing; Membrane;
KW Reference proteome; Transmembrane; Transmembrane helix.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:22328496"
FT CHAIN 2..157
FT /note="Protein snakeskin"
FT /id="PRO_0000437456"
FT TOPO_DOM 2..6
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250|UniProtKB:Q9VW87"
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 28..53
FT /note="Extracellular"
FT /evidence="ECO:0000250|UniProtKB:Q9VW87"
FT TRANSMEM 54..74
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 75..87
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250|UniProtKB:Q9VW87"
FT TRANSMEM 88..108
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 109..130
FT /note="Extracellular"
FT /evidence="ECO:0000250|UniProtKB:Q9VW87"
FT TRANSMEM 131..151
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 152..157
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250|UniProtKB:Q9VW87"
SQ SEQUENCE 157 AA; 17289 MW; 0D3A5A13ED4FE87D CRC64;
MVSVQTIATI VVKTFKIVLN IIILVLYRTG YNGEFLGVGG TWNLNEEKNP DAEIVASGVI
VGYLIYTLVQ IVTFLFGTTE HKRALSEIVM NFVGVFLWIA VGAVALHYWG GYQGEHQFQF
VFAEKQVGLA VGALCVINGA IYLLDTALSV IHFTKEM