SSRP_MYCPN
ID SSRP_MYCPN Reviewed; 147 AA.
AC P75043;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023};
DE AltName: Full=Small protein B {ECO:0000255|HAMAP-Rule:MF_00023};
GN Name=smpB {ECO:0000255|HAMAP-Rule:MF_00023}; OrderedLocusNames=MPN_074;
GN ORFNames=MP081;
OS Mycoplasma pneumoniae (strain ATCC 29342 / M129) (Mycoplasmoides
OS pneumoniae).
OC Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
OX NCBI_TaxID=272634;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29342 / M129;
RX PubMed=8948633; DOI=10.1093/nar/24.22.4420;
RA Himmelreich R., Hilbert H., Plagens H., Pirkl E., Li B.-C., Herrmann R.;
RT "Complete sequence analysis of the genome of the bacterium Mycoplasma
RT pneumoniae.";
RL Nucleic Acids Res. 24:4420-4449(1996).
RN [2]
RP DISRUPTION PHENOTYPE.
RC STRAIN=ATCC 29342 / M129;
RX PubMed=10591650; DOI=10.1126/science.286.5447.2165;
RA Hutchison C.A., Peterson S.N., Gill S.R., Cline R.T., White O.,
RA Fraser C.M., Smith H.O., Venter J.C.;
RT "Global transposon mutagenesis and a minimal Mycoplasma genome.";
RL Science 286:2165-2169(1999).
CC -!- FUNCTION: Required for rescue of stalled ribosomes mediated by trans-
CC translation. Binds to transfer-messenger RNA (tmRNA), required for
CC stable association of tmRNA with ribosomes. tmRNA and SmpB together
CC mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is
CC encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and
CC it encodes a 'tag peptide', a short internal open reading frame. During
CC trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering
CC the A-site of stalled ribosomes, displacing the stalled mRNA. The
CC ribosome then switches to translate the ORF on the tmRNA; the nascent
CC peptide is terminated with the 'tag peptide' encoded by the tmRNA and
CC targeted for degradation. The ribosome is freed to recommence
CC translation, which seems to be the essential function of trans-
CC translation. {ECO:0000255|HAMAP-Rule:MF_00023}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00023}.
CC Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
CC {ECO:0000255|HAMAP-Rule:MF_00023}.
CC -!- DISRUPTION PHENOTYPE: May not be essential, 1 disruption mutant has
CC been isolated. {ECO:0000269|PubMed:10591650}.
CC -!- SIMILARITY: Belongs to the SmpB family. {ECO:0000255|HAMAP-
CC Rule:MF_00023}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; U00089; AAB95729.1; -; Genomic_DNA.
DR PIR; S73407; S73407.
DR RefSeq; NP_109762.1; NC_000912.1.
DR AlphaFoldDB; P75043; -.
DR SMR; P75043; -.
DR STRING; 272634.MPN_074; -.
DR EnsemblBacteria; AAB95729; AAB95729; MPN_074.
DR KEGG; mpn:MPN_074; -.
DR PATRIC; fig|272634.6.peg.75; -.
DR HOGENOM; CLU_108953_0_1_14; -.
DR OMA; WTNHSAR; -.
DR BioCyc; MPNE272634:G1GJ3-112-MON; -.
DR Proteomes; UP000000808; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0070929; P:trans-translation; IEA:UniProtKB-UniRule.
DR CDD; cd09294; SmpB; 1.
DR Gene3D; 2.40.280.10; -; 1.
DR HAMAP; MF_00023; SmpB; 1.
DR InterPro; IPR023620; SmpB.
DR InterPro; IPR000037; SsrA-bd_prot.
DR InterPro; IPR020081; SsrA-bd_prot_CS.
DR PANTHER; PTHR30308; PTHR30308; 1.
DR Pfam; PF01668; SmpB; 1.
DR SUPFAM; SSF74982; SSF74982; 1.
DR TIGRFAMs; TIGR00086; smpB; 1.
DR PROSITE; PS01317; SSRP; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Reference proteome; RNA-binding.
FT CHAIN 1..147
FT /note="SsrA-binding protein"
FT /id="PRO_0000102989"
SQ SEQUENCE 147 AA; 17087 MW; 6F4AF3E5A4412C40 CRC64;
MRVLVNNPRA QYDYYLLTGY CAGLVLKGSE VKSLALGQGS LKEAYVFIDK HEVYIKDFSI
SPYAFSGEFN HPFKRVKKLL LNRNEIKQIT ARQKQEGLSI IPLKVFFKNG KIKMEIWLAK
PKKKFDKREA IKSKTIQREL RQQYGSP