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STALP_PONAB
ID   STALP_PONAB             Reviewed;         436 AA.
AC   Q5R558;
DT   19-JUL-2005, integrated into UniProtKB/Swiss-Prot.
DT   21-DEC-2004, sequence version 1.
DT   03-AUG-2022, entry version 70.
DE   RecName: Full=AMSH-like protease;
DE            Short=AMSH-LP;
DE            EC=3.4.19.- {ECO:0000250|UniProtKB:Q96FJ0};
DE   AltName: Full=STAM-binding protein-like 1;
GN   Name=STAMBPL1; Synonyms=AMSHLP;
OS   Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pongo.
OX   NCBI_TaxID=9601;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Brain cortex;
RG   The German cDNA consortium;
RL   Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Zinc metalloprotease that specifically cleaves 'Lys-63'-
CC       linked polyubiquitin chains. Acts as a positive regulator of the TORC1
CC       signaling pathway by mediating 'Lys-63'-linked deubiquitination of
CC       SESN2, thereby inhibiting SESN2-interaction with the GATOR2 complex.
CC       Does not cleave 'Lys-48'-linked polyubiquitin chains.
CC       {ECO:0000250|UniProtKB:Q96FJ0}.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000250|UniProtKB:Q96FJ0};
CC       Note=Binds 2 Zn(2+) ions per subunit. {ECO:0000250|UniProtKB:Q96FJ0};
CC   -!- DOMAIN: The JAMM motif is essential for the protease activity.
CC       {ECO:0000250|UniProtKB:O35864}.
CC   -!- SIMILARITY: Belongs to the peptidase M67C family. {ECO:0000305}.
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DR   EMBL; CR861012; CAH93108.1; -; mRNA.
DR   RefSeq; NP_001126841.1; NM_001133369.1.
DR   AlphaFoldDB; Q5R558; -.
DR   SMR; Q5R558; -.
DR   STRING; 9601.ENSPPYP00000002847; -.
DR   MEROPS; M67.003; -.
DR   GeneID; 100173848; -.
DR   KEGG; pon:100173848; -.
DR   CTD; 57559; -.
DR   eggNOG; KOG2880; Eukaryota.
DR   InParanoid; Q5R558; -.
DR   OrthoDB; 411229at2759; -.
DR   Proteomes; UP000001595; Unplaced.
DR   GO; GO:0070122; F:isopeptidase activity; IEA:InterPro.
DR   GO; GO:0061578; F:Lys63-specific deubiquitinase activity; ISS:UniProtKB.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0140492; F:metal-dependent deubiquitinase activity; IEA:InterPro.
DR   CDD; cd08066; MPN_AMSH_like; 1.
DR   InterPro; IPR000555; JAMM/MPN+_dom.
DR   InterPro; IPR037518; MPN.
DR   InterPro; IPR044098; STAMBP/STALP-like_MPN.
DR   InterPro; IPR015063; USP8_dimer.
DR   Pfam; PF01398; JAB; 1.
DR   Pfam; PF08969; USP8_dimer; 1.
DR   SMART; SM00232; JAB_MPN; 1.
DR   PROSITE; PS50249; MPN; 1.
PE   2: Evidence at transcript level;
KW   Acetylation; Hydrolase; Metal-binding; Metalloprotease; Phosphoprotein;
KW   Protease; Reference proteome; Ubl conjugation pathway; Zinc.
FT   CHAIN           1..436
FT                   /note="AMSH-like protease"
FT                   /id="PRO_0000194876"
FT   DOMAIN          269..397
FT                   /note="MPN"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   MOTIF           347..360
FT                   /note="JAMM motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   BINDING         347
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   BINDING         349
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   BINDING         360
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   BINDING         362
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q96FJ0"
FT   BINDING         402
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q96FJ0"
FT   BINDING         408
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q96FJ0"
FT   BINDING         410
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q96FJ0"
FT   SITE            292
FT                   /note="Indirect zinc-binding"
FT                   /evidence="ECO:0000250|UniProtKB:Q96FJ0"
FT   MOD_RES         1
FT                   /note="N-acetylmethionine"
FT                   /evidence="ECO:0000250|UniProtKB:Q96FJ0"
FT   MOD_RES         25
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q96FJ0"
FT   MOD_RES         242
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q96FJ0"
SQ   SEQUENCE   436 AA;  49740 MW;  DED87DF5062D66EA CRC64;
     MDQPFTVNSL KKLAAMPDHT DISLSPEERV RALSKLGCNV TISEDITPRR YFRSGVEMER
     MASVYLEEGN LENAFVLYNK FITLFVEKLP NHRDYQQCAV PEKQDIMKKL KEIAFPRTDE
     LKNDLLKKYN VEYQEYLQSK NQYKAEILKK LEHQRLIEAE RKRIAQMRQQ QLESEQFLFF
     EDQLKKQELA RGQMRSQQTS GLSEQIDGSA LSCFSTHQNN SLLNVFADQP NKSDATNYAS
     HSPPVNRALT PAATLSAVQN LVVEGLRCVV LPKDLCHKFL QLAESNTVRG IETCGILCGK
     LTHNEFTITH VIVPKQSAGP DYCDVENVEE LFNVQDQHDL LTLGWIHTHP TQTAFLSSVD
     LHTHCSYQLM LSEAIAIVCS PKHKDTGIFR LTNAGMLEVS ACKKKGFHPH TKEPRLFSIC
     KHVLVKDIKI IVLDLR
 
 
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