STEP1_ARATH
ID STEP1_ARATH Reviewed; 146 AA.
AC Q9M7I9; O49486;
DT 29-MAY-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Stress enhanced protein 1, chloroplastic {ECO:0000305};
DE Flags: Precursor;
GN Name=SEP1 {ECO:0000303|PubMed:10725357}; OrderedLocusNames=At4g34190;
GN ORFNames=F28A23.50;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], INDUCTION BY LIGHT, AND SUBCELLULAR LOCATION.
RC STRAIN=cv. Columbia;
RX PubMed=10725357; DOI=10.1073/pnas.97.7.3741;
RA Heddad M., Adamska I.;
RT "Light stress-regulated two-helix proteins in Arabidopsis thaliana related
RT to the chlorophyll a/b-binding gene family.";
RL Proc. Natl. Acad. Sci. U.S.A. 97:3741-3746(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May be involved in non-photochemical quenching, a process
CC that maintains the balance between dissipation and utilization of light
CC energy to minimize generation of oxidizing molecules, thereby
CC protecting the plant against photo-oxidative damage (By similarity).
CC May play a photoprotective role in the thylakoid membrane in response
CC to light stress (Probable). {ECO:0000250|UniProtKB:Q9XF91,
CC ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000269|PubMed:10725357}; Multi-pass membrane protein
CC {ECO:0000255}.
CC -!- INDUCTION: Present at low levels under low light conditions, but
CC accumulates under high-intensity light. Induced by UV-A illumination.
CC Fades out upon wounding. {ECO:0000269|PubMed:10725357}.
CC -!- SIMILARITY: Belongs to the ELIP/psbS family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA17553.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB80136.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF133716; AAF61625.1; -; mRNA.
DR EMBL; AL021961; CAA17553.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161585; CAB80136.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE86338.1; -; Genomic_DNA.
DR EMBL; AY090357; AAL91261.1; -; mRNA.
DR EMBL; BT000842; AAN38679.1; -; mRNA.
DR EMBL; AY088639; AAM66961.1; -; mRNA.
DR PIR; T05417; T05417.
DR RefSeq; NP_567958.1; NM_119582.4.
DR AlphaFoldDB; Q9M7I9; -.
DR BioGRID; 14849; 6.
DR IntAct; Q9M7I9; 2.
DR STRING; 3702.AT4G34190.1; -.
DR PaxDb; Q9M7I9; -.
DR PRIDE; Q9M7I9; -.
DR EnsemblPlants; AT4G34190.1; AT4G34190.1; AT4G34190.
DR GeneID; 829567; -.
DR Gramene; AT4G34190.1; AT4G34190.1; AT4G34190.
DR KEGG; ath:AT4G34190; -.
DR Araport; AT4G34190; -.
DR TAIR; locus:2124236; AT4G34190.
DR eggNOG; ENOG502S4YQ; Eukaryota.
DR HOGENOM; CLU_126272_1_0_1; -.
DR OMA; RKPVCKA; -.
DR OrthoDB; 1620445at2759; -.
DR PRO; PR:Q9M7I9; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9M7I9; baseline and differential.
DR Genevisible; Q9M7I9; AT.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009523; C:photosystem II; IEA:UniProtKB-KW.
DR GO; GO:0016168; F:chlorophyll binding; TAS:TAIR.
DR GO; GO:0071486; P:cellular response to high light intensity; IEP:UniProtKB.
DR GO; GO:0071492; P:cellular response to UV-A; IEP:UniProtKB.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR GO; GO:0009644; P:response to high light intensity; IEP:TAIR.
DR GO; GO:0009611; P:response to wounding; IEP:UniProtKB.
PE 2: Evidence at transcript level;
KW Chloroplast; Membrane; Photosynthesis; Photosystem II; Plastid;
KW Reference proteome; Thylakoid; Transit peptide; Transmembrane;
KW Transmembrane helix.
FT TRANSIT 1..73
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 74..146
FT /note="Stress enhanced protein 1, chloroplastic"
FT /id="PRO_0000422367"
FT TRANSMEM 84..104
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 120..140
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 146 AA; 14858 MW; 10812982FA7E5658 CRC64;
MALSQVSASL AFSLPNSGAL KLATITNPTS TCRVHVPQLA GIRSTFASGS PLLPLKLSMT
RRGGNRAASV SIRSEQSTEG SSGLDIWLGR GAMVGFAVAI TVEISTGKGL LENFGVASPL
PTVALAVTAL VGVLAAVFIF QSSSKN
