STLP1_ORYSJ
ID STLP1_ORYSJ Reviewed; 393 AA.
AC Q94DD4; A0A0N7KE36;
DT 14-OCT-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Sialyltransferase-like protein 1 {ECO:0000303|PubMed:16452316};
DE Short=OsSTLP1 {ECO:0000303|PubMed:16452316};
DE EC=2.4.99.- {ECO:0000305};
GN Name=STLP1 {ECO:0000303|PubMed:16452316};
GN OrderedLocusNames=Os01g0858900 {ECO:0000312|EMBL:BAF06777.1},
GN LOC_Os01g63970 {ECO:0000305};
GN ORFNames=OsJ_04139 {ECO:0000312|EMBL:EAZ14214.1},
GN P0489B03.1 {ECO:0000312|EMBL:BAB90552.1},
GN P0683F02.29 {ECO:0000312|EMBL:BAB63715.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP FUNCTION, AND TISSUE SPECIFICITY.
RX PubMed=16452316; DOI=10.1093/jb/mvj029;
RA Takashima S., Abe T., Yoshida S., Kawahigashi H., Saito T., Tsuji S.,
RA Tsujimoto M.;
RT "Analysis of sialyltransferase-like proteins from Oryza sativa.";
RL J. Biochem. 139:279-287(2006).
CC -!- FUNCTION: Possesses sialyltransferase-like activity in vitro. Transfers
CC sialic acid to the oligosaccharide Gal-beta-1,3-GalNAc and to
CC glycoproteins such as asialofetuin, alpha-1-acid glycoprotein (NeuAc-
CC alpha-2,3-Gal-beta-1,3-GalNAc-) and andasialo-alpha-1-acid
CC glycoprotein. The transferred sialic acid is linked to galactose of
CC Gal-beta-1,3-GalNAc through alpha-2,6-linkage.
CC {ECO:0000269|PubMed:16452316}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000250|UniProtKB:Q9SGD2}; Single-pass type II membrane protein
CC {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in leaves and stalks. Expressed at low
CC levels in roots. {ECO:0000269|PubMed:16452316}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 29 family.
CC {ECO:0000305}.
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DR EMBL; AP003289; BAB63715.1; -; Genomic_DNA.
DR EMBL; AP003794; BAB90552.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF06777.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS75321.1; -; Genomic_DNA.
DR EMBL; CM000138; EAZ14214.1; -; Genomic_DNA.
DR EMBL; AK107493; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015621154.1; XM_015765668.1.
DR AlphaFoldDB; Q94DD4; -.
DR SMR; Q94DD4; -.
DR STRING; 4530.OS01T0858900-01; -.
DR CAZy; GT29; Glycosyltransferase Family 29.
DR PaxDb; Q94DD4; -.
DR PRIDE; Q94DD4; -.
DR EnsemblPlants; Os01t0858900-01; Os01t0858900-01; Os01g0858900.
DR GeneID; 4325058; -.
DR Gramene; Os01t0858900-01; Os01t0858900-01; Os01g0858900.
DR KEGG; osa:4325058; -.
DR eggNOG; KOG2692; Eukaryota.
DR HOGENOM; CLU_044787_1_0_1; -.
DR InParanoid; Q94DD4; -.
DR OMA; MVCNSSH; -.
DR OrthoDB; 891104at2759; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000007752; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR Genevisible; Q94DD4; OS.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0008373; F:sialyltransferase activity; IDA:UniProtKB.
DR GO; GO:0006486; P:protein glycosylation; IEA:InterPro.
DR Gene3D; 3.90.1480.20; -; 1.
DR InterPro; IPR001675; Glyco_trans_29.
DR InterPro; IPR038578; GT29-like_sf.
DR Pfam; PF00777; Glyco_transf_29; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Glycosyltransferase; Golgi apparatus; Membrane;
KW Reference proteome; Signal-anchor; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..393
FT /note="Sialyltransferase-like protein 1"
FT /id="PRO_0000434312"
FT TOPO_DOM 1..8
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 9..27
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 28..393
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT CARBOHYD 49
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 212
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 258
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CONFLICT 39
FT /note="P -> T (in Ref. 6; AK107493)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 393 AA; 43536 MW; 6A7F53E29F8EBBC0 CRC64;
MKRPLRRPFA VLLFVVLCAA ASFPSVLRRS VGPAPVLAPL PPLDPARLNA TLLRLAAADP
SEAPLRRDVD DLLEGRLPAS SARARAWRLR GDRLHLHLRH HQFPVYRRGH HPDHDHDPLL
HPLPRQELHL DPSLRRALRS WHRLRRHDPG VLRNLPSLLS LPGRIPSCAV VGNSGILLGA
SHGALIDSHA AVFRLNNARI SGFAANVGAK TNLSFINSNV LHLCARRPNC FCHPYGDGVP
ILLYICQAAH FLDVASCNAS SRSLHAASIS VTDPRLDVLC ARIVKYYSLR RFVAETGRAA
EEWSSTRDAA MFHYSSGMQA IMVAVGVCDR VSVFGFGKAA DAKHHYHSNQ KAELDLHDYK
AEYAFYRDLA DRPEVVPFLN DAGIAVPPVV FYH
