STRBP_XENLA
ID STRBP_XENLA Reviewed; 686 AA.
AC Q6DCD0;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Spermatid perinuclear RNA-binding protein;
GN Name=strbp;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Oocyte;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May be involved in spermatogenesis and sperm function. Binds
CC to double-stranded DNA and RNA (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
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DR EMBL; BC078118; AAH78118.1; -; mRNA.
DR RefSeq; NP_001087171.1; NM_001093702.1.
DR AlphaFoldDB; Q6DCD0; -.
DR SMR; Q6DCD0; -.
DR DNASU; 447060; -.
DR GeneID; 447060; -.
DR KEGG; xla:447060; -.
DR CTD; 447060; -.
DR Xenbase; XB-GENE-1005089; strbp.L.
DR OrthoDB; 612611at2759; -.
DR Proteomes; UP000186698; Chromosome 8L.
DR Bgee; 447060; Expressed in egg cell and 16 other tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
DR CDD; cd19909; DSRM_STRBP_rpt1; 1.
DR Gene3D; 3.30.460.10; -; 1.
DR InterPro; IPR014720; dsRBD_dom.
DR InterPro; IPR006561; DZF_dom.
DR InterPro; IPR043519; NT_sf.
DR InterPro; IPR030446; STRBP.
DR InterPro; IPR044472; STRBP_DSRM_1.
DR PANTHER; PTHR45762:SF1; PTHR45762:SF1; 1.
DR Pfam; PF00035; dsrm; 2.
DR Pfam; PF07528; DZF; 1.
DR SMART; SM00358; DSRM; 2.
DR SMART; SM00572; DZF; 1.
DR PROSITE; PS50137; DS_RBD; 2.
DR PROSITE; PS51703; DZF; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Developmental protein; Differentiation; DNA-binding;
KW Reference proteome; Repeat; RNA-binding; Spermatogenesis.
FT CHAIN 1..686
FT /note="Spermatid perinuclear RNA-binding protein"
FT /id="PRO_0000274922"
FT DOMAIN 5..360
FT /note="DZF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01040"
FT DOMAIN 387..453
FT /note="DRBM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00266"
FT DOMAIN 509..575
FT /note="DRBM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00266"
FT REGION 339..368
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 464..498
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 350..368
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 476..498
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 686 AA; 75304 MW; 978542A84D05B36E CRC64;
MRSIRSFAND DRHVMAKHSI IYPSPEELEA VQNMVSTVES ALKQVSDWID EQKCTKIENG
SPIKNESTED SSAKDESGKV LCGVMRIGLV AKGLLIKDDM DLELVLLCKE KPSTRLLTTV
AENLPLQIQK ITEETFQVEQ CVEESSLLIQ SSKEPKLTLK VILSSPLFRE EEERPGGVEN
VAMKDPPDLL DRQKCLNALA SLRHAKWFQA RANGLKSCVI VLRILRDLCN RVPTWAQLKG
WPLELICEKA IGTCNRPLGA GEALRRVMEC LAFGTLLPGG SGLHDPCEKE PTDALAYMTV
KEREEITHSA QHALRLLAFG QIYKVLQMDP LPSNKPFQKY SWSNSDREGS CLKRPFDDGS
SDEKDPNKKL KRNLSKILDS KPIDPNQPMN ALMRLNQIRP GLQYKLLSQS GPVHAPVFTM
SVDVDGTTHE ASGPSKKTAK LYVTVKVLQA MGYPTGFDTD LECLSSDEKS DSEGKNETSF
SSSSNITGNS NADNNTLEVR TQGPILTASG KNPVMELNEK RRGLKYELIS ESGGSHDKRF
IMEVEVDAQK FKGAGPNKKV AKASAALAAL EKLFSGPNAV NNKKKKIIPQ TKGVVSTAVS
AAVQAARGRG RVAMARGAFV GATAAAAPGY IAPGMRREEM HPEIFNGYAA PYAYSAATPA
YGIPKRMVLL PVMKFPAYPV PHYSFF