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STT7_ARATH
ID   STT7_ARATH              Reviewed;         562 AA.
AC   Q9S713; A4FVQ4; Q56WW0;
DT   26-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   03-AUG-2022, entry version 134.
DE   RecName: Full=Serine/threonine-protein kinase STN7, chloroplastic;
DE            EC=2.7.11.1;
DE   AltName: Full=Protein STATE TRANSITION 7;
DE   AltName: Full=Stt7 homolog;
DE   Flags: Precursor;
GN   Name=STN7; OrderedLocusNames=At1g68830; ORFNames=F14K14.6, T6L1.2;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Bautista V.R., Kim C.J., Chen H., Wu S.Y., De Los Reyes C., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 236-562.
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   FUNCTION, SUBCELLULAR LOCATION, AND MUTAGENESIS OF LYS-167.
RX   PubMed=15729347; DOI=10.1038/nature03286;
RA   Bellafiore S., Barneche F., Peltier G., Rochaix J.-D.;
RT   "State transitions and light adaptation require chloroplast thylakoid
RT   protein kinase STN7.";
RL   Nature 433:892-895(2005).
RN   [6]
RP   FUNCTION.
RX   PubMed=16237446; DOI=10.1038/nature04016;
RA   Bonardi V., Pesaresi P., Becker T., Schleiff E., Wagner R.,
RA   Pfannschmidt T., Jahns P., Leister D.;
RT   "Photosystem II core phosphorylation and photosynthetic acclimation require
RT   two different protein kinases.";
RL   Nature 437:1179-1182(2005).
RN   [7]
RP   FUNCTION.
RX   PubMed=16897465; DOI=10.1007/s11103-006-9044-8;
RA   Tikkanen M., Piippo M., Suorsa M., Sirpioe S., Mulo P., Vainonen J.,
RA   Vener A.V., Allahverdiyeva Y., Aro E.-M.;
RT   "State transitions revisited-a buffering system for dynamic low light
RT   acclimation of Arabidopsis.";
RL   Plant Mol. Biol. 62:779-793(2006).
RN   [8]
RP   FUNCTION.
RX   PubMed=19113838; DOI=10.1021/bi8016334;
RA   Fristedt R., Carlberg I., Zygadlo A., Piippo M., Nurmi M., Aro E.M.,
RA   Scheller H.V., Vener A.V.;
RT   "Intrinsically unstructured phosphoprotein TSP9 regulates light harvesting
RT   in Arabidopsis thaliana.";
RL   Biochemistry 48:499-509(2009).
RN   [9]
RP   FUNCTION.
RX   PubMed=19706797; DOI=10.1105/tpc.108.064964;
RA   Pesaresi P., Hertle A., Pribil M., Kleine T., Wagner R., Strissel H.,
RA   Ihnatowicz A., Bonardi V., Scharfenberg M., Schneider A., Pfannschmidt T.,
RA   Leister D.;
RT   "Arabidopsis STN7 kinase provides a link between short- and long-term
RT   photosynthetic acclimation.";
RL   Plant Cell 21:2402-2423(2009).
RN   [10]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-526; THR-537 AND THR-541, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=19376835; DOI=10.1104/pp.109.138677;
RA   Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
RA   Grossmann J., Gruissem W., Baginsky S.;
RT   "Large-scale Arabidopsis phosphoproteome profiling reveals novel
RT   chloroplast kinase substrates and phosphorylation networks.";
RL   Plant Physiol. 150:889-903(2009).
RN   [11]
RP   FUNCTION.
RC   STRAIN=cv. Columbia;
RX   PubMed=22616989; DOI=10.1016/j.febslet.2012.03.061;
RA   Ingelsson B., Vener A.V.;
RT   "Phosphoproteomics of Arabidopsis chloroplasts reveals involvement of the
RT   STN7 kinase in phosphorylation of nucleoid protein pTAC16.";
RL   FEBS Lett. 586:1265-1271(2012).
CC   -!- FUNCTION: Serine/threonine protein kinase required for state transition
CC       by phosphorylating light-harvesting complex II outer antennae (LCHII).
CC       State transition plays a central role in response to environmental
CC       changes and allows to adjust to changing light conditions via the
CC       redistribution of light excitation energy between photosystem II (PSII)
CC       and photosystem I (PSI). Phosphorylates the minor light harvesting
CC       protein LHCB4.2/CP29 and is involved in the light-dependent
CC       phosphorylation of TSP9. Acts as a key component of the long-term
CC       response (LTR) signaling pathway. Mediates phosphorylation-dependent
CC       PTAC16 subcellular localization to regulate plastid gene expression
CC       (PubMed:22616989). {ECO:0000269|PubMed:15729347,
CC       ECO:0000269|PubMed:16237446, ECO:0000269|PubMed:16897465,
CC       ECO:0000269|PubMed:19113838, ECO:0000269|PubMed:19706797,
CC       ECO:0000269|PubMed:22616989}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-
CC         [protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-
CC         COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:83421, ChEBI:CHEBI:456216; EC=2.7.11.1;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-
CC         threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060,
CC         Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216;
CC         EC=2.7.11.1;
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC       {ECO:0000269|PubMed:15729347}.
CC   -!- PTM: Phosphorylated.
CC   -!- SIMILARITY: Belongs to the protein kinase superfamily. Ser/Thr protein
CC       kinase family. {ECO:0000255|PROSITE-ProRule:PRU00159}.
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DR   EMBL; AC011665; AAG51596.1; -; Genomic_DNA.
DR   EMBL; AC011914; AAG52037.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE34846.1; -; Genomic_DNA.
DR   EMBL; BT030352; ABO38765.1; -; mRNA.
DR   EMBL; AK221920; BAD94332.1; -; mRNA.
DR   PIR; A96713; A96713.
DR   RefSeq; NP_564946.1; NM_105557.6.
DR   AlphaFoldDB; Q9S713; -.
DR   SMR; Q9S713; -.
DR   BioGRID; 28436; 3.
DR   IntAct; Q9S713; 1.
DR   MINT; Q9S713; -.
DR   STRING; 3702.AT1G68830.1; -.
DR   iPTMnet; Q9S713; -.
DR   PaxDb; Q9S713; -.
DR   PRIDE; Q9S713; -.
DR   ProteomicsDB; 245351; -.
DR   EnsemblPlants; AT1G68830.1; AT1G68830.1; AT1G68830.
DR   GeneID; 843215; -.
DR   Gramene; AT1G68830.1; AT1G68830.1; AT1G68830.
DR   KEGG; ath:AT1G68830; -.
DR   Araport; AT1G68830; -.
DR   TAIR; locus:2205465; AT1G68830.
DR   eggNOG; KOG0594; Eukaryota.
DR   HOGENOM; CLU_029227_0_0_1; -.
DR   InParanoid; Q9S713; -.
DR   OMA; MILGKVQ; -.
DR   OrthoDB; 1139314at2759; -.
DR   PhylomeDB; Q9S713; -.
DR   PRO; PR:Q9S713; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9S713; baseline and differential.
DR   Genevisible; Q9S713; AT.
DR   GO; GO:0009507; C:chloroplast; IDA:TAIR.
DR   GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0042651; C:thylakoid membrane; IDA:TAIR.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004672; F:protein kinase activity; IDA:TAIR.
DR   GO; GO:0106310; F:protein serine kinase activity; IEA:RHEA.
DR   GO; GO:0004674; F:protein serine/threonine kinase activity; IMP:TAIR.
DR   GO; GO:0007623; P:circadian rhythm; IEP:TAIR.
DR   GO; GO:0009643; P:photosynthetic acclimation; IDA:TAIR.
DR   GO; GO:0006468; P:protein phosphorylation; IEA:InterPro.
DR   GO; GO:0042548; P:regulation of photosynthesis, light reaction; IMP:TAIR.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   InterPro; IPR000719; Prot_kinase_dom.
DR   InterPro; IPR017441; Protein_kinase_ATP_BS.
DR   InterPro; IPR008271; Ser/Thr_kinase_AS.
DR   InterPro; IPR044803; STT7-like.
DR   PANTHER; PTHR46699; PTHR46699; 1.
DR   Pfam; PF00069; Pkinase; 1.
DR   SMART; SM00220; S_TKc; 1.
DR   SUPFAM; SSF56112; SSF56112; 1.
DR   PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
DR   PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
DR   PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PE   1: Evidence at protein level;
KW   ATP-binding; Chloroplast; Kinase; Membrane; Nucleotide-binding;
KW   Phosphoprotein; Plastid; Reference proteome;
KW   Serine/threonine-protein kinase; Thylakoid; Transferase; Transit peptide.
FT   TRANSIT         1..45
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000255"
FT   CHAIN           46..562
FT                   /note="Serine/threonine-protein kinase STN7, chloroplastic"
FT                   /id="PRO_0000024386"
FT   DOMAIN          134..452
FT                   /note="Protein kinase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   ACT_SITE        279
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159,
FT                   ECO:0000255|PROSITE-ProRule:PRU10027"
FT   BINDING         140..148
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         167
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   MOD_RES         526
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19376835"
FT   MOD_RES         537
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:19376835"
FT   MOD_RES         541
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:19376835"
FT   MUTAGEN         167
FT                   /note="K->R,Q: Loss of function."
FT                   /evidence="ECO:0000269|PubMed:15729347"
SQ   SEQUENCE   562 AA;  63252 MW;  F06E0940E6D470C0 CRC64;
     MATISPGGAY IGTPSPFLGK KLKPFSLTSP ILSFKPTVKL NSSCRAQLID TVHNLFIGVG
     VGLPCTVMEC GDMIYRSTLP KSNGLTITAP GVALALTALS YLWATPGVAP GFFDMFVLAF
     VERLFRPTFR KDDFVVGKKL GEGSFGVVYK VSLSKKRSNE EGEYVLKKAT EYGAVEIWMN
     ERVRRACGNS CADFVYGFLD KSSKKGPEYW LLWKYEGEST LAGLMQSKEF PYNVETIILG
     KVQDLPKGLE RENKIIQTIM RQLLFALDGL HSTGIIHRDV KPQNIIFSEG SRSFKIIDLG
     AAADLRVGIN YIPKEFLLDP RYAAPEQYIM STQTPSAPSA PVAAALSPVL WQMNLPDRFD
     IYSIGLIFLQ MAFPSLRSDS NLIQFNRQLK RCDYDLTAWR KLVEPRASAD LRRGFELVDL
     DGGIGWELLT SMVRYKARQR ISAKAALAHP YFDRQGLLAL SVMQNLRMQY FRATQQDYSE
     AANWVIQLMA KNGTEKDGGF TETQLQELRE KEPRKKANAQ RNALASALRL QRKLVKTVTE
     TIDEISDGRK TVWWNRWIPR EE
 
 
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