STX18_RAT
ID STX18_RAT Reviewed; 334 AA.
AC Q68FW4;
DT 07-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Syntaxin-18;
GN Name=Stx18;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Syntaxin that may be involved in targeting and fusion of
CC Golgi-derived retrograde transport vesicles with the ER. {ECO:0000250}.
CC -!- SUBUNIT: Component of a SNARE complex consisting of STX18, USE1L,
CC BNIP1/SEC20L, and SEC22B. RINT1/TIP20L and ZW10 are associated with the
CC complex through interaction with BNIP1/SEC20L. Interacts directly with
CC USE1L and BNIP1/SEC20L (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane {ECO:0000250};
CC Single-pass type IV membrane protein {ECO:0000250}. Golgi apparatus
CC membrane {ECO:0000305}; Single-pass type IV membrane protein
CC {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the syntaxin family. {ECO:0000305}.
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DR EMBL; BC079183; AAH79183.1; -; mRNA.
DR RefSeq; NP_001012151.1; NM_001012151.1.
DR AlphaFoldDB; Q68FW4; -.
DR CORUM; Q68FW4; -.
DR IntAct; Q68FW4; 6.
DR STRING; 10116.ENSRNOP00000008410; -.
DR jPOST; Q68FW4; -.
DR PaxDb; Q68FW4; -.
DR PRIDE; Q68FW4; -.
DR Ensembl; ENSRNOT00000095745; ENSRNOP00000082982; ENSRNOG00000006139.
DR GeneID; 360953; -.
DR KEGG; rno:360953; -.
DR CTD; 53407; -.
DR RGD; 1310058; Stx18.
DR eggNOG; KOG3894; Eukaryota.
DR GeneTree; ENSGT00390000014853; -.
DR HOGENOM; CLU_071402_1_0_1; -.
DR InParanoid; Q68FW4; -.
DR OMA; WEESRVE; -.
DR OrthoDB; 1141750at2759; -.
DR PhylomeDB; Q68FW4; -.
DR TreeFam; TF105868; -.
DR Reactome; R-RNO-6811434; COPI-dependent Golgi-to-ER retrograde traffic.
DR PRO; PR:Q68FW4; -.
DR Proteomes; UP000002494; Chromosome 14.
DR Bgee; ENSRNOG00000006139; Expressed in testis and 20 other tissues.
DR Genevisible; Q68FW4; RN.
DR GO; GO:0005783; C:endoplasmic reticulum; ISO:RGD.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0031201; C:SNARE complex; IBA:GO_Central.
DR GO; GO:0019904; F:protein domain specific binding; ISO:RGD.
DR GO; GO:0005484; F:SNAP receptor activity; IEA:InterPro.
DR GO; GO:0090158; P:endoplasmic reticulum membrane organization; ISO:RGD.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR GO; GO:1902953; P:positive regulation of ER to Golgi vesicle-mediated transport; ISO:RGD.
DR GO; GO:1902117; P:positive regulation of organelle assembly; ISO:RGD.
DR GO; GO:1903358; P:regulation of Golgi organization; ISO:RGD.
DR GO; GO:0006890; P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum; IBA:GO_Central.
DR InterPro; IPR019529; Syntaxin-18_N.
DR InterPro; IPR006012; Syntaxin/epimorphin_CS.
DR Pfam; PF10496; Syntaxin-18_N; 1.
DR PROSITE; PS00914; SYNTAXIN; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Endoplasmic reticulum; ER-Golgi transport; Golgi apparatus;
KW Membrane; Protein transport; Reference proteome; Transmembrane;
KW Transmembrane helix; Transport.
FT CHAIN 1..334
FT /note="Syntaxin-18"
FT /id="PRO_0000210234"
FT TOPO_DOM 1..308
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 309..329
FT /note="Helical; Anchor for type IV membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 330..334
FT /note="Vesicular"
FT /evidence="ECO:0000255"
FT DOMAIN 242..304
FT /note="t-SNARE coiled-coil homology"
FT REGION 29..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 166..225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..50
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..207
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 334 AA; 38512 MW; 98CB261E598BFF84 CRC64;
MAVDITLLFR ASVKTVKTRN KALGVAVGGG ADGSRDELFR RSPRPKGDFS SRAREVISHI
GKLRDFLLEH RKEYINAYSH TMSEYGRMTD TERDQIDQDA QIFMRTCKDA IQQLRTEAHK
EIHSQQVKEH RTAVLDFVED YLKRVCKLYS EQRAIRVKRV VDKKRLSKLE PEPHTKRKEP
ASEKSSHNAS QDSEEKPAAE DLPEKPLAES QPELGTWGDG KGEDELSPEE IQMFEQENQR
LIGEMNSLFD EVRQIEGKVV EISRLQEIFT EKVLQQETEI DSIHQLVVGA TENIKEGNED
IREAIKNNAG FRVWILFFLV MCSFSLLFLD WYDS