STX6_CHICK
ID STX6_CHICK Reviewed; 254 AA.
AC Q5ZL19;
DT 08-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Syntaxin-6;
GN Name=STX6; ORFNames=RCJMB04_8d16;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Involved in intracellular vesicle trafficking. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000250|UniProtKB:O43752}; Single-pass type IV membrane protein
CC {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the syntaxin family. {ECO:0000305}.
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DR EMBL; AJ719915; CAG31574.1; -; mRNA.
DR RefSeq; NP_001006531.1; NM_001006531.1.
DR AlphaFoldDB; Q5ZL19; -.
DR SMR; Q5ZL19; -.
DR STRING; 9031.ENSGALP00000006160; -.
DR PaxDb; Q5ZL19; -.
DR PRIDE; Q5ZL19; -.
DR Ensembl; ENSGALT00000006170; ENSGALP00000006160; ENSGALG00000003880.
DR GeneID; 424413; -.
DR KEGG; gga:424413; -.
DR CTD; 8677; -.
DR VEuPathDB; HostDB:geneid_424413; -.
DR eggNOG; KOG3202; Eukaryota.
DR GeneTree; ENSGT00940000157639; -.
DR HOGENOM; CLU_061883_1_0_1; -.
DR InParanoid; Q5ZL19; -.
DR OMA; EHDPYRF; -.
DR OrthoDB; 1563292at2759; -.
DR PhylomeDB; Q5ZL19; -.
DR Reactome; R-GGA-6811438; Intra-Golgi traffic.
DR Reactome; R-GGA-6811440; Retrograde transport at the Trans-Golgi-Network.
DR PRO; PR:Q5ZL19; -.
DR Proteomes; UP000000539; Chromosome 8.
DR Bgee; ENSGALG00000003880; Expressed in spleen and 13 other tissues.
DR GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR GO; GO:0005769; C:early endosome; ISS:AgBase.
DR GO; GO:0012505; C:endomembrane system; IBA:GO_Central.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IBA:GO_Central.
DR GO; GO:0030285; C:integral component of synaptic vesicle membrane; IBA:GO_Central.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; ISS:AgBase.
DR GO; GO:0045335; C:phagocytic vesicle; IEA:Ensembl.
DR GO; GO:0031201; C:SNARE complex; IBA:GO_Central.
DR GO; GO:0032588; C:trans-Golgi network membrane; IEA:Ensembl.
DR GO; GO:0005484; F:SNAP receptor activity; IBA:GO_Central.
DR GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
DR GO; GO:0019905; F:syntaxin binding; IEA:Ensembl.
DR GO; GO:0032456; P:endocytic recycling; IEA:Ensembl.
DR GO; GO:0007032; P:endosome organization; ISS:AgBase.
DR GO; GO:0090161; P:Golgi ribbon formation; IEA:Ensembl.
DR GO; GO:0048193; P:Golgi vesicle transport; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IBA:GO_Central.
DR GO; GO:0032880; P:regulation of protein localization; IEA:Ensembl.
DR GO; GO:0042147; P:retrograde transport, endosome to Golgi; IBA:GO_Central.
DR GO; GO:0048278; P:vesicle docking; IBA:GO_Central.
DR GO; GO:0006906; P:vesicle fusion; ISS:AgBase.
DR InterPro; IPR010989; SNARE.
DR InterPro; IPR045242; Syntaxin.
DR InterPro; IPR015260; Syntaxin-6_N.
DR InterPro; IPR006012; Syntaxin/epimorphin_CS.
DR InterPro; IPR000727; T_SNARE_dom.
DR PANTHER; PTHR19957; PTHR19957; 1.
DR Pfam; PF05739; SNARE; 1.
DR Pfam; PF09177; Syntaxin-6_N; 1.
DR SMART; SM00397; t_SNARE; 1.
DR SUPFAM; SSF47661; SSF47661; 1.
DR PROSITE; PS00914; SYNTAXIN; 1.
DR PROSITE; PS50192; T_SNARE; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Golgi apparatus; Membrane; Protein transport;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..254
FT /note="Syntaxin-6"
FT /id="PRO_0000210212"
FT TOPO_DOM 1..233
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 234..254
FT /note="Helical; Anchor for type IV membrane protein"
FT /evidence="ECO:0000255"
FT DOMAIN 162..224
FT /note="t-SNARE coiled-coil homology"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00202"
FT REGION 103..138
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 46..72
FT /evidence="ECO:0000255"
FT COMPBIAS 103..137
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 254 AA; 29155 MW; 704D97BCE83317AD CRC64;
MSMEDPFFVV KGEVQKAVNT AQGLFQRWTE LLQDPSIATR EEIDWTTNEL RNNLRSIEWD
LEDLDETISI VEANPRKFNL DATELGIRKS FITSTRQVVR EMKDQMSNSS MQALAERKNR
QALLGESSSQ SWSSGPDKYS RLDRELQLAN SHFIEEQQAQ QQLIVEQQDE QLELVSGSIG
VLKNMSQRIG GELEEQAVML DDFSHELDST HSRLDNVMKK LAKVSHMTSD RRQWCAIIVL
FVILLVVLVL FLVL