SUCD_CLOK5
ID SUCD_CLOK5 Reviewed; 453 AA.
AC P38947; A5N1M7;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Succinate-semialdehyde dehydrogenase (acetylating);
DE EC=1.2.1.76;
GN Name=sucD; OrderedLocusNames=CKL_3015;
OS Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=431943;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 1-24.
RX PubMed=8550525; DOI=10.1128/jb.178.3.871-880.1996;
RA Soehling B., Gottschalk G.;
RT "Molecular analysis of the anaerobic succinate degradation pathway in
RT Clostridium kluyveri.";
RL J. Bacteriol. 178:871-880(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 8527 / DSM 555 / NCIMB 10680;
RX PubMed=18218779; DOI=10.1073/pnas.0711093105;
RA Seedorf H., Fricke W.F., Veith B., Brueggemann H., Liesegang H.,
RA Strittmatter A., Miethke M., Buckel W., Hinderberger J., Li F.,
RA Hagemeier C., Thauer R.K., Gottschalk G.;
RT "The genome of Clostridium kluyveri, a strict anaerobe with unique
RT metabolic features.";
RL Proc. Natl. Acad. Sci. U.S.A. 105:2128-2133(2008).
CC -!- FUNCTION: Catalyzes the reduction of succinate semialdehyde to
CC succinyl-CoA. The enzyme is specific for succinate semialdehyde and
CC succinyl-CoA, and only shows low activity with palmitoyl-CoA. There is
CC no activity with NAD(+) as cosubstrate.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=CoA + NADP(+) + succinate semialdehyde = H(+) + NADPH +
CC succinyl-CoA; Xref=Rhea:RHEA:26450, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:57287, ChEBI:CHEBI:57292, ChEBI:CHEBI:57706,
CC ChEBI:CHEBI:57783, ChEBI:CHEBI:58349; EC=1.2.1.76;
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=4.3 mM for NADPH;
CC KM=3.2 mM for succinyl-CoA;
CC KM=2.7 mM for succinate semialdehyde;
CC KM=2.9 mM for CoA;
CC KM=4.0 mM for NADP(+);
CC Vmax=28.9 umol/min/mg enzyme toward NADPH;
CC Vmax=28.9 umol/min/mg enzyme toward succinyl-CoA;
CC Vmax=28.3 umol/min/mg enzyme toward succinate semialdehyde;
CC Vmax=27.3 umol/min/mg enzyme toward CoA;
CC Vmax=31.2 umol/min/mg enzyme toward NADP(+);
CC pH dependence:
CC Optimum pH is 7.0 for the reduction reaction and 8.5 for the
CC oxidation reaction.;
CC -!- SUBUNIT: Homodimer.
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DR EMBL; L21902; AAA92347.1; -; Genomic_DNA.
DR EMBL; CP000673; EDK35023.1; -; Genomic_DNA.
DR RefSeq; WP_012103358.1; NC_009706.1.
DR AlphaFoldDB; P38947; -.
DR SMR; P38947; -.
DR STRING; 431943.CKL_3015; -.
DR EnsemblBacteria; EDK35023; EDK35023; CKL_3015.
DR KEGG; ag:AAA92347; -.
DR KEGG; ckl:CKL_3015; -.
DR eggNOG; COG1012; Bacteria.
DR HOGENOM; CLU_028794_3_1_9; -.
DR OMA; INQIQCF; -.
DR OrthoDB; 384611at2; -.
DR BioCyc; MetaCyc:MON-13462; -.
DR Proteomes; UP000002411; Chromosome.
DR GO; GO:0016620; F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; IEA:InterPro.
DR Gene3D; 3.40.309.10; -; 1.
DR Gene3D; 3.40.605.10; -; 1.
DR InterPro; IPR016161; Ald_DH/histidinol_DH.
DR InterPro; IPR016163; Ald_DH_C.
DR InterPro; IPR016162; Ald_DH_N.
DR InterPro; IPR015590; Aldehyde_DH_dom.
DR Pfam; PF00171; Aldedh; 1.
DR SUPFAM; SSF53720; SSF53720; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; NADP; Oxidoreductase; Reference proteome.
FT CHAIN 1..453
FT /note="Succinate-semialdehyde dehydrogenase (acetylating)"
FT /id="PRO_0000072297"
FT ACT_SITE 242
FT /evidence="ECO:0000250"
FT BINDING 188..193
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250"
FT CONFLICT 16
FT /note="V -> A (in Ref. 1; AAA92347)"
FT /evidence="ECO:0000305"
FT CONFLICT 379
FT /note="A -> ARTVLPISRLVVNQPATTAG (in Ref. 1; AAA92347)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 453 AA; 48968 MW; 61706F0AEBC865D7 CRC64;
MSNEVSIKEL IEKAKVAQKK LEAYSQEQVD VLVKALGKVV YDNAEMFAKE AVEETEMGVY
EDKVAKCHLK SGAIWNHIKD KKTVGIIKEE PERALVYVAK PKGVVAATTP ITNPVVTPMC
NAMAAIKGRN TIIVAPHPKA KKVSAHTVEL MNAELKKLGA PENIIQIVEA PSREAAKELM
ESADVVIATG GAGRVKAAYS SGRPAYGVGP GNSQVIVDKG YDYNKAAQDI ITGRKYDNGI
ICSSEQSVIA PAEDYDKVIA AFVENGAFYV EDEETVEKFR STLFKDGKIN SKIIGKSVQI
IADLAGVKVP EGTKVIVLKG KGAGEKDVLC KEKMCPVLVA LKYDTFEEAV EIAMANYMYE
GAGHTAGIHS DNDENIRYAG TVLPISRLVV NQPATTAGGS FNNGFNPTTT LGCGSWGRNS
ISENLTYEHL INVSRIGYFN KEAKVPSYEE IWG