SUMO3_ARATH
ID SUMO3_ARATH Reviewed; 111 AA.
AC Q9FLP5;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 108.
DE RecName: Full=Small ubiquitin-related modifier 3;
DE Short=AtSUMO3;
GN Name=SUMO3; Synonyms=SUM3; OrderedLocusNames=At5g55170; ORFNames=MCO15.12;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=12482876; DOI=10.1074/jbc.m209694200;
RA Kurepa J., Walker J.M., Smalle J., Gosink M.M., Davis S.J., Durham T.L.,
RA Sung D.Y., Vierstra R.D.;
RT "The small ubiquitin-like modifier (SUMO) protein modification system in
RT Arabidopsis. Accumulation of SUMO1 and -2 conjugates is increased by
RT stress.";
RL J. Biol. Chem. 278:6862-6872(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Ubiquitin-like protein which can be covalently attached to
CC target lysines as a monomer. Does not seem to be involved in protein
CC degradation and may function as an antagonist of ubiquitin in the
CC degradation process (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts with SAE2, SCE1, SIZ1 and MMS21 Covalently attached
CC to a number of proteins. {ECO:0000250}.
CC -!- INTERACTION:
CC Q9FLP5; O81313: IND; NbExp=3; IntAct=EBI-25512645, EBI-4446992;
CC Q9FLP5; Q9LQF0: TCP23; NbExp=3; IntAct=EBI-25512645, EBI-15192297;
CC Q9FLP5; Q5CCK4: VAL2; NbExp=3; IntAct=EBI-25512645, EBI-15193683;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}.
CC -!- MISCELLANEOUS: Stress conditions rapidly and substantially elevates the
CC amount of SUMO1 and SUMO2 conjugates with a concomitant reduction in
CC the amount of free SUMO proteins. The SUMO conjugation system plays an
CC important function in stress protection and/or repair.
CC -!- SIMILARITY: Belongs to the ubiquitin family. SUMO subfamily.
CC {ECO:0000305}.
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DR EMBL; AB010071; BAB08586.1; -; Genomic_DNA.
DR EMBL; CP002688; AED96595.1; -; Genomic_DNA.
DR EMBL; AF510521; AAN03847.1; -; mRNA.
DR EMBL; BT024755; ABD59093.1; -; mRNA.
DR RefSeq; NP_200328.1; NM_124899.4.
DR AlphaFoldDB; Q9FLP5; -.
DR SMR; Q9FLP5; -.
DR BioGRID; 20854; 129.
DR IntAct; Q9FLP5; 3.
DR STRING; 3702.AT5G55170.1; -.
DR PaxDb; Q9FLP5; -.
DR EnsemblPlants; AT5G55170.1; AT5G55170.1; AT5G55170.
DR GeneID; 835610; -.
DR Gramene; AT5G55170.1; AT5G55170.1; AT5G55170.
DR KEGG; ath:AT5G55170; -.
DR Araport; AT5G55170; -.
DR TAIR; locus:2161695; AT5G55170.
DR eggNOG; KOG1769; Eukaryota.
DR HOGENOM; CLU_148322_4_0_1; -.
DR InParanoid; Q9FLP5; -.
DR OMA; GDEIDAC; -.
DR OrthoDB; 1583700at2759; -.
DR PhylomeDB; Q9FLP5; -.
DR PRO; PR:Q9FLP5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FLP5; baseline and differential.
DR Genevisible; Q9FLP5; AT.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0031386; F:protein tag; IDA:TAIR.
DR GO; GO:0044389; F:ubiquitin-like protein ligase binding; IBA:GO_Central.
DR GO; GO:0016925; P:protein sumoylation; IDA:TAIR.
DR InterPro; IPR022617; Rad60/SUMO-like_dom.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR Pfam; PF11976; Rad60-SLD; 1.
DR SUPFAM; SSF54236; SSF54236; 1.
DR PROSITE; PS50053; UBIQUITIN_2; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Isopeptide bond; Nucleus; Reference proteome;
KW Ubl conjugation pathway.
FT CHAIN 1..111
FT /note="Small ubiquitin-related modifier 3"
FT /id="PRO_0000397034"
FT DOMAIN 16..93
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00214"
FT CROSSLNK 93
FT /note="Glycyl lysine isopeptide (Gly-Lys) (interchain with
FT K-? in acceptor proteins)"
SQ SEQUENCE 111 AA; 12580 MW; 79544A00709B67EC CRC64;
MSNPQDDKPI DQEQEAHVIL KVKSQDGDEV LFKNKKSAPL KKLMYVYCDR RGLKLDAFAF
IFNGARIGGL ETPDELDMED GDVIDACRAM SGGLRANQRQ WSYMLFDHNG L