SURFL_ARATH
ID SURFL_ARATH Reviewed; 384 AA.
AC Q9LP74; F4HYG8;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 21-SEP-2011, sequence version 2.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Surfeit locus protein 1-like;
DE Short=Surfeit 1-like;
DE AltName: Full=Cytochrome c oxidase assembly protein SURF1-like;
GN OrderedLocusNames=At1g48510; ORFNames=T1N15.12;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: May be involved in the biogenesis of the COX complex.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000250};
CC Multi-pass membrane protein {ECO:0000250}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9LP74-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the SURF1 (TC 3.D.4.8) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF79698.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC020889; AAF79698.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE32305.1; -; Genomic_DNA.
DR RefSeq; NP_175284.2; NM_103747.2. [Q9LP74-1]
DR AlphaFoldDB; Q9LP74; -.
DR BioGRID; 26497; 2.
DR IntAct; Q9LP74; 2.
DR STRING; 3702.AT1G48510.1; -.
DR PaxDb; Q9LP74; -.
DR PRIDE; Q9LP74; -.
DR ProteomicsDB; 228404; -. [Q9LP74-1]
DR EnsemblPlants; AT1G48510.1; AT1G48510.1; AT1G48510. [Q9LP74-1]
DR GeneID; 841272; -.
DR Gramene; AT1G48510.1; AT1G48510.1; AT1G48510. [Q9LP74-1]
DR KEGG; ath:AT1G48510; -.
DR Araport; AT1G48510; -.
DR TAIR; locus:2198030; AT1G48510.
DR eggNOG; KOG1563; Eukaryota.
DR HOGENOM; CLU_047737_1_0_1; -.
DR InParanoid; Q9LP74; -.
DR OMA; CILFFIC; -.
DR PRO; PR:Q9LP74; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LP74; baseline and differential.
DR Genevisible; Q9LP74; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR GO; GO:0090351; P:seedling development; IMP:TAIR.
DR InterPro; IPR002994; Surf1/Shy1.
DR InterPro; IPR045214; Surf1/Surf4.
DR PANTHER; PTHR23427; PTHR23427; 1.
DR Pfam; PF02104; SURF1; 1.
DR PROSITE; PS50895; SURF1; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Membrane; Mitochondrion;
KW Mitochondrion inner membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..384
FT /note="Surfeit locus protein 1-like"
FT /id="PRO_0000412565"
FT TRANSMEM 55..75
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 302..322
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 338..358
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 384 AA; 43185 MW; 2AA2CD7B41239CE2 CRC64;
MTKLVSKIFK RLISQSQYMS SSTTSNLPAA SQTSNLESQL LSSAPPPAKK KRGSALLWYL
VGFTTYGLGE TYKFLQTQVE HLDSRKQCLE MKPMKLNTTK DLDGLGFRRV VCKGIFDEQR
SIYVGPKPRS MSKSSEIGFY VITPLLPIPN EPNSMKSPIL VNRGWVPSDW KENSLESLGT
GGLVAAAKES RKANKLLSSQ QSLLSKFWYK LNNPMIVEDQ VSRAMHVEVV GVVRKSETPG
IYTLVNYPSS LAWFYLDVPK LALAMGFGED TMYIESTYTD MDESRTYPVP RDVENLTRSK
DIPLDYHLYT VLWHWSSLTC FIKASSILMR RLTKSDPIGV EPILIPISIL VFICTKIYSL
RNLFCKIDTI GVGCVTKLDT GKVK