SUS4_ORYSJ
ID SUS4_ORYSJ Reviewed; 809 AA.
AC Q10LP5;
DT 05-SEP-2012, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Sucrose synthase 4;
DE Short=OsSUS4;
DE EC=2.4.1.13;
DE AltName: Full=Sucrose-UDP glucosyltransferase 4;
GN Name=SUS4; OrderedLocusNames=Os03g0340500, LOC_Os03g22120;
GN ORFNames=OsJ_10783;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, TISSUE SPECIFICITY, AND
RP DEVELOPMENTAL STAGE.
RC STRAIN=cv. Nipponbare;
RX PubMed=21533550; DOI=10.1007/s10059-011-1038-y;
RA Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.;
RT "Identification and characterization of the duplicate rice sucrose synthase
RT genes OsSUS5 and OsSUS7 which are associated with the plasma membrane.";
RL Mol. Cells 31:553-561(2011).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [8]
RP GENE FAMILY, AND TISSUE SPECIFICITY.
RX DOI=10.1016/j.plantsci.2008.02.009;
RA Hirose T., Scofield G.N., Terao T.;
RT "An expression analysis profile for the entire sucrose synthase gene family
RT in rice.";
RL Plant Sci. 174:534-543(2008).
CC -!- FUNCTION: Sucrose-cleaving enzyme that provides UDP-glucose and
CC fructose for various metabolic pathways. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=an NDP-alpha-D-glucose + D-fructose = a ribonucleoside 5'-
CC diphosphate + H(+) + sucrose; Xref=Rhea:RHEA:16241,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:17992, ChEBI:CHEBI:37721,
CC ChEBI:CHEBI:57930, ChEBI:CHEBI:76533; EC=2.4.1.13;
CC -!- TISSUE SPECIFICITY: Predominantly expressed in the leaf tissues and in
CC caryopses. {ECO:0000269|PubMed:21533550, ECO:0000269|Ref.8}.
CC -!- DEVELOPMENTAL STAGE: In the caryopse, slightly expressed during the
CC middle storage phase and was strongly expressed at the later storage
CC phase. {ECO:0000269|PubMed:21533550}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 1 family. Plant sucrose
CC synthase subfamily. {ECO:0000305}.
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DR EMBL; HQ895722; AEX32877.1; -; mRNA.
DR EMBL; DP000009; ABF95853.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF11978.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS84118.1; -; Genomic_DNA.
DR EMBL; CM000140; EAZ26864.1; -; Genomic_DNA.
DR EMBL; AK099406; BAG94112.1; -; mRNA.
DR EMBL; AK102158; BAG95417.1; -; mRNA.
DR RefSeq; XP_015632177.1; XM_015776691.1.
DR AlphaFoldDB; Q10LP5; -.
DR SMR; Q10LP5; -.
DR STRING; 4530.OS03T0340500-01; -.
DR CAZy; GT4; Glycosyltransferase Family 4.
DR PaxDb; Q10LP5; -.
DR PRIDE; Q10LP5; -.
DR EnsemblPlants; Os03t0340500-01; Os03t0340500-01; Os03g0340500.
DR GeneID; 4332788; -.
DR Gramene; Os03t0340500-01; Os03t0340500-01; Os03g0340500.
DR KEGG; osa:4332788; -.
DR eggNOG; KOG0853; Eukaryota.
DR HOGENOM; CLU_019158_1_0_1; -.
DR InParanoid; Q10LP5; -.
DR OMA; WISRFEI; -.
DR OrthoDB; 170782at2759; -.
DR BRENDA; 2.4.1.13; 4460.
DR PlantReactome; R-OSA-1119452; Galactose degradation II.
DR PlantReactome; R-OSA-1119465; Sucrose biosynthesis.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000007752; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR ExpressionAtlas; Q10LP5; baseline and differential.
DR Genevisible; Q10LP5; OS.
DR GO; GO:0016157; F:sucrose synthase activity; IBA:GO_Central.
DR GO; GO:0005985; P:sucrose metabolic process; IEA:InterPro.
DR InterPro; IPR001296; Glyco_trans_1.
DR InterPro; IPR000368; Sucrose_synth.
DR InterPro; IPR012820; Sucrose_synthase_pln/cyn.
DR PANTHER; PTHR45839; PTHR45839; 1.
DR Pfam; PF00534; Glycos_transf_1; 1.
DR Pfam; PF00862; Sucrose_synth; 1.
DR TIGRFAMs; TIGR02470; sucr_synth; 1.
PE 2: Evidence at transcript level;
KW Glycosyltransferase; Reference proteome; Transferase.
FT CHAIN 1..809
FT /note="Sucrose synthase 4"
FT /id="PRO_0000418806"
FT REGION 275..753
FT /note="GT-B glycosyltransferase"
FT /evidence="ECO:0000250"
SQ SEQUENCE 809 AA; 92217 MW; 4D20B0F0E42A56DC CRC64;
MSGPKLDRTP SIRDRVEDTL HAHRNELVAL LSKYVSQGKG ILQPHHILDA LDEVQSSGGR
ALVEGPFLDV LRSAQEAIVL PPFVAIAVRP RPGVWEYVRV NVHELSVEQL TVSEYLRFKE
ELVDGQYNDP YILELDFEPF NASVPRPNRS SSIGNGVQFL NRHLSSIMFR NKDCLEPLLD
FLRGHRHKGH VMMLNDRIQS LGRLQSVLTK AEEHLSKLPA DTPYSQFAYK FQEWGLEKGW
GDTAGYVLEM IHLLLDVLQA PDPSTLETFL GRIPMIFNVV VVSPHGYFGQ ANVLGLPDTG
GQIVYILDQV RALENEMVLR LKKQGLDFTP KILIVTRLIP EAKGTSCNQR LERISGTQHT
YILRVPFRNE NGILRKWISR FDVWPYLEKF AEDAAGEIAA ELQGTPDFII GNYSDGNLVA
SLLSYKMGIT QCNIAHALEK TKYPDSDIYW TKYDEKYHFS CQFTADIIAM NNADFIITST
YQEIAGSKNT VGQYESHTAF TLPGLYRIVH GIDVFDPKFN IVSPGADMSI YFPYTEKAKR
LTSLHGSLEN LISDPEQNDE HIGHLDDRSK PILFSMARLD RVKNITGLVE AYAKNARLRE
LVNLVVVAGY NDVKKSKDRE EIAEIEKMHE LIKTYNLFGQ FRWISAQTNR ARNGELYRYI
ADTHGAFVQP AFYEAFGLTV VEAMTCGLPT FATVHGGPAE IIEHGISGFH IDPYHPDQAA
NLIADFFEQC KQDPNHWVEV SNRGLQRIYE KYTWKIYSER LMTLAGVYGF WKYVSKLERR
ETRRYLEMFY ILKFRELAKT VPLAVDEAH