SUS5_ORYSJ
ID SUS5_ORYSJ Reviewed; 855 AA.
AC H6TFZ4; Q0JE91; Q7XNQ9;
DT 05-SEP-2012, integrated into UniProtKB/Swiss-Prot.
DT 18-APR-2012, sequence version 1.
DT 03-AUG-2022, entry version 49.
DE RecName: Full=Sucrose synthase 5;
DE Short=OsSUS5;
DE EC=2.4.1.13;
DE AltName: Full=Sucrose-UDP glucosyltransferase 5;
GN Name=SUS5; OrderedLocusNames=Os04g0309600, LOC_Os04g24430;
GN ORFNames=OSJNBa0033H08.16;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), GENE FAMILY, SUBCELLULAR LOCATION,
RP AND TISSUE SPECIFICITY.
RC STRAIN=cv. Nipponbare;
RX PubMed=21533550; DOI=10.1007/s10059-011-1038-y;
RA Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.;
RT "Identification and characterization of the duplicate rice sucrose synthase
RT genes OsSUS5 and OsSUS7 which are associated with the plasma membrane.";
RL Mol. Cells 31:553-561(2011).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP GENE FAMILY.
RX DOI=10.1016/j.plantsci.2008.02.009;
RA Hirose T., Scofield G.N., Terao T.;
RT "An expression analysis profile for the entire sucrose synthase gene family
RT in rice.";
RL Plant Sci. 174:534-543(2008).
CC -!- FUNCTION: Sucrose-cleaving enzyme that provides UDP-glucose and
CC fructose for various metabolic pathways. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=an NDP-alpha-D-glucose + D-fructose = a ribonucleoside 5'-
CC diphosphate + H(+) + sucrose; Xref=Rhea:RHEA:16241,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:17992, ChEBI:CHEBI:37721,
CC ChEBI:CHEBI:57930, ChEBI:CHEBI:76533; EC=2.4.1.13;
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:21533550}. Membrane
CC {ECO:0000269|PubMed:21533550}; Peripheral membrane protein
CC {ECO:0000269|PubMed:21533550}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=H6TFZ4-1; Sequence=Displayed;
CC Name=2;
CC IsoId=H6TFZ4-2; Sequence=VSP_044079;
CC -!- TISSUE SPECIFICITY: Predominantly expressed in roots, flowers and
CC immature seeds. {ECO:0000269|PubMed:21533550}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 1 family. Plant sucrose
CC synthase subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAE03984.3; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; HQ895723; AEX32878.1; -; mRNA.
DR EMBL; AL662942; CAE03984.3; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008210; BAF14346.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS88514.1; -; Genomic_DNA.
DR EMBL; AK063304; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015634172.1; XM_015778686.1. [H6TFZ4-1]
DR AlphaFoldDB; H6TFZ4; -.
DR SMR; H6TFZ4; -.
DR STRING; 4530.OS04T0309600-01; -.
DR CAZy; GT4; Glycosyltransferase Family 4.
DR PaxDb; H6TFZ4; -.
DR PRIDE; H6TFZ4; -.
DR EnsemblPlants; Os04t0309600-01; Os04t0309600-01; Os04g0309600. [H6TFZ4-2]
DR GeneID; 4335447; -.
DR Gramene; Os04t0309600-01; Os04t0309600-01; Os04g0309600. [H6TFZ4-2]
DR KEGG; osa:4335447; -.
DR eggNOG; KOG0853; Eukaryota.
DR HOGENOM; CLU_019158_1_0_1; -.
DR InParanoid; H6TFZ4; -.
DR OMA; LEPVDNT; -.
DR OrthoDB; 115766at2759; -.
DR BRENDA; 2.4.1.13; 4460.
DR PlantReactome; R-OSA-1119452; Galactose degradation II.
DR PlantReactome; R-OSA-1119465; Sucrose biosynthesis.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR Genevisible; H6TFZ4; OS.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016157; F:sucrose synthase activity; IBA:GO_Central.
DR GO; GO:0005985; P:sucrose metabolic process; IEA:InterPro.
DR InterPro; IPR001296; Glyco_trans_1.
DR InterPro; IPR000368; Sucrose_synth.
DR InterPro; IPR012820; Sucrose_synthase_pln/cyn.
DR PANTHER; PTHR45839; PTHR45839; 1.
DR Pfam; PF00534; Glycos_transf_1; 1.
DR Pfam; PF00862; Sucrose_synth; 1.
DR TIGRFAMs; TIGR02470; sucr_synth; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cytoplasm; Glycosyltransferase; Membrane;
KW Reference proteome; Transferase.
FT CHAIN 1..855
FT /note="Sucrose synthase 5"
FT /id="PRO_0000418807"
FT REGION 279..758
FT /note="GT-B glycosyltransferase"
FT /evidence="ECO:0000250"
FT VAR_SEQ 589..599
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:12869764"
FT /id="VSP_044079"
SQ SEQUENCE 855 AA; 97812 MW; 4A0C5F64A0346B50 CRC64;
MASKLSFKRM DSIAETMPDA LRQSRYQMKR CFQRYVSKGK RLLKNQQLME ELEKSLDDKV
EKEKLVEGFL GYIICSTQEA VVLPPFVAFA VRMNPGIWEY VKVHSDDLSV EGITPSEYLK
FKETLYDEKW AKDDNSLEVD FGALDLSTPH LTLPSSIGNG LQFVSKFMSS KLGGKPESMK
PLLDYLLTLN YRGEKLMIND TIDTVSKLQT ALLLAEVFVS GLPKYTPYLK FEQRFQEWGL
ERGWGDTAER CKETLNCLSE VLQAPDPTNM EKFFSRVPSI FNIVIFSIHG YFGQEKVLGL
PDTGGQVVYI LDQVRAMEEE LLQRIKQQGL HVTPKILVLT RLIPDAKGTK CNVELEPVEN
TKYSHILRVP FKTEDGKDLR QWVSRFDIYP YLERYAQDSC AKILDILEGK PDLIIGNYTD
GNLVASLLSN KLCVTQGTIA HALEKTKYED SDVKWREMDQ KYHFSCQFTA DMISMNTSDF
IITSTYQEIA GSKEKPGQYE HHYAFTMPGL CRYATGINVF DPKFNIAAPG ADQSIYFPFT
QKQKRLTDLH PQIDELLYSK DDTDEHIGYL ADRNKPIIFS MARLDKVKNI TGLVEWYGQN
KKLRDLVNLV VVAGLLDASQ SKDREEIEEI NKMHNLMDRY QLKGQIRWIK AQTDRVRNGE
LYRCIADTKG AFVQPALYEA FGLTVIEAMN CGLPTFATNQ GGPAEIIIDG VSGFHVNPIN
DREAGIKIAD FFQKCKEDPS YWNKVSTAGL QRICECYTWK IYATRVLNMG STYSFWKTLN
KEERQAKQRY LQIFYNVQYR NLAKAMARAG DQQARQTTTG VAPSEIVVRP KERKPQTRMQ
RILTRLAGQK PPVSE