SVIP_RAT
ID SVIP_RAT Reviewed; 76 AA.
AC P0C0A9;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 30-AUG-2005, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Small VCP/p97-interacting protein;
GN Name=Svip;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND INTERACTION WITH VCP.
RC TISSUE=Brain;
RX PubMed=12529442; DOI=10.1091/mbc.02-07-0115;
RA Nagahama M., Suzuki M., Hamada Y., Hatsuzawa K., Tani K., Yamamoto A.,
RA Tagaya M.;
RT "SVIP is a novel VCP/p97-interacting protein whose expression causes cell
RT vacuolation.";
RL Mol. Biol. Cell 14:262-273(2003).
CC -!- FUNCTION: Overexpression causes the formation of large vacuoles that
CC seemed to be derived from the endoplasmic reticulum.
CC {ECO:0000269|PubMed:12529442}.
CC -!- SUBUNIT: Interacts with VCP. {ECO:0000250|UniProtKB:Q8NHG7,
CC ECO:0000269|PubMed:12529442}.
CC -!- SUBCELLULAR LOCATION: Smooth endoplasmic reticulum membrane; Peripheral
CC membrane protein. Golgi apparatus membrane; Peripheral membrane
CC protein. Cell membrane; Peripheral membrane protein. Membrane
CC {ECO:0000250|UniProtKB:Q8NHG7}; Lipid-anchor
CC {ECO:0000250|UniProtKB:Q8NHG7}.
CC -!- TISSUE SPECIFICITY: Ubiquitous.
CC -!- SIMILARITY: Belongs to the SVIP family. {ECO:0000305}.
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DR RefSeq; NP_001258013.1; NM_001271084.1.
DR AlphaFoldDB; P0C0A9; -.
DR SMR; P0C0A9; -.
DR STRING; 10116.ENSRNOP00000052878; -.
DR PaxDb; P0C0A9; -.
DR PRIDE; P0C0A9; -.
DR GeneID; 499157; -.
DR KEGG; rno:499157; -.
DR UCSC; RGD:1565432; rat.
DR CTD; 258010; -.
DR RGD; 1565432; Svip.
DR VEuPathDB; HostDB:ENSRNOG00000037137; -.
DR eggNOG; ENOG502S5MU; Eukaryota.
DR HOGENOM; CLU_174267_1_0_1; -.
DR InParanoid; P0C0A9; -.
DR OMA; CCGQSAE; -.
DR PhylomeDB; P0C0A9; -.
DR Reactome; R-RNO-6798695; Neutrophil degranulation.
DR PRO; PR:P0C0A9; -.
DR Proteomes; UP000002494; Chromosome 1.
DR Bgee; ENSRNOG00000037137; Expressed in pancreas and 20 other tissues.
DR Genevisible; P0C0A9; RN.
DR GO; GO:0031225; C:anchored component of membrane; ISO:RGD.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; ISO:RGD.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030868; C:smooth endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0051117; F:ATPase binding; ISO:RGD.
DR GO; GO:0043621; F:protein self-association; ISO:RGD.
DR GO; GO:1903070; P:negative regulation of ER-associated ubiquitin-dependent protein catabolic process; ISO:RGD.
DR GO; GO:0031333; P:negative regulation of protein-containing complex assembly; ISO:RGD.
DR GO; GO:1904153; P:negative regulation of retrograde protein transport, ER to cytosol; ISO:RGD.
DR GO; GO:1904240; P:negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly; IDA:ParkinsonsUK-UCL.
DR GO; GO:0010508; P:positive regulation of autophagy; ISO:RGD.
DR GO; GO:1903061; P:positive regulation of protein lipidation; ISO:RGD.
DR InterPro; IPR031632; SVIP.
DR PANTHER; PTHR35269; PTHR35269; 1.
DR Pfam; PF15811; SVIP; 1.
PE 1: Evidence at protein level;
KW Cell membrane; Endoplasmic reticulum; Golgi apparatus; Lipoprotein;
KW Membrane; Myristate; Phosphoprotein; Reference proteome.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:Q8NHG7"
FT CHAIN 2..76
FT /note="Small VCP/p97-interacting protein"
FT /id="PRO_0000072339"
FT REGION 1..76
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 21..33
FT /note="VCP/p97-interacting motif (VIM)"
FT /evidence="ECO:0000250|UniProtKB:Q8NHG7"
FT COMPBIAS 20..38
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 45..60
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 46
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q8NHG7"
FT LIPID 2
FT /note="N-myristoyl glycine"
FT /evidence="ECO:0000250|UniProtKB:Q8NHG7"
SQ SEQUENCE 76 AA; 8248 MW; 485974815DBFD4FC CRC64;
MGLCFPCPAE SAPPSPSPEE KRAKLAEAAE RRQKEAASRG ILDIQSVEAK KKKKEQLEKQ
METSGPPAGG LRWTVS