SVOPL_DANRE
ID SVOPL_DANRE Reviewed; 506 AA.
AC Q1LVS8; Q5U3R1;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Putative transporter SVOPL;
DE AltName: Full=SVOP-like protein;
GN Name=svopl; ORFNames=si:dkeyp-27e10.2, zgc:101741;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 24-506.
RC TISSUE=Olfactory epithelium;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the major facilitator superfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH85429.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; BX649444; CAK11366.1; -; Genomic_DNA.
DR EMBL; BC085429; AAH85429.1; ALT_INIT; mRNA.
DR RefSeq; NP_001007408.2; NM_001007407.2.
DR RefSeq; NP_001038694.1; NM_001045229.1.
DR RefSeq; XP_017210498.1; XM_017355009.1.
DR AlphaFoldDB; Q1LVS8; -.
DR SMR; Q1LVS8; -.
DR STRING; 7955.ENSDARP00000075190; -.
DR PaxDb; Q1LVS8; -.
DR Ensembl; ENSDART00000080744; ENSDARP00000075190; ENSDARG00000057983.
DR Ensembl; ENSDART00000150664; ENSDARP00000125241; ENSDARG00000057983.
DR GeneID; 492766; -.
DR KEGG; dre:492766; -.
DR CTD; 136306; -.
DR ZFIN; ZDB-GENE-041114-109; svopl.
DR eggNOG; KOG0253; Eukaryota.
DR GeneTree; ENSGT00940000158632; -.
DR HOGENOM; CLU_001265_46_0_1; -.
DR InParanoid; Q1LVS8; -.
DR OMA; QIWIIWL; -.
DR OrthoDB; 1430447at2759; -.
DR PhylomeDB; Q1LVS8; -.
DR TreeFam; TF313465; -.
DR PRO; PR:Q1LVS8; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 4.
DR Bgee; ENSDARG00000057983; Expressed in gastrula and 18 other tissues.
DR ExpressionAtlas; Q1LVS8; baseline.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR Gene3D; 1.20.1250.20; -; 1.
DR InterPro; IPR011701; MFS.
DR InterPro; IPR020846; MFS_dom.
DR InterPro; IPR005828; MFS_sugar_transport-like.
DR InterPro; IPR036259; MFS_trans_sf.
DR Pfam; PF07690; MFS_1; 1.
DR Pfam; PF00083; Sugar_tr; 1.
DR SUPFAM; SSF103473; SSF103473; 1.
DR PROSITE; PS50850; MFS; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix;
KW Transport.
FT CHAIN 1..506
FT /note="Putative transporter SVOPL"
FT /id="PRO_0000294463"
FT TRANSMEM 57..77
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 104..124
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 133..153
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 190..210
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 220..240
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 297..317
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 362..382
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 397..417
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 444..464
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 472..492
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CONFLICT 43
FT /note="V -> A (in Ref. 2; AAH85429)"
FT /evidence="ECO:0000305"
FT CONFLICT 111
FT /note="F -> L (in Ref. 2; AAH85429)"
FT /evidence="ECO:0000305"
FT CONFLICT 119
FT /note="V -> A (in Ref. 2; AAH85429)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 506 AA; 56552 MW; 6DBE9FBCCA667FCD CRC64;
MALKRSSSMK TQLVDAIQLE EVEMEEEITT TSNNNNPVEP AQVKEPKCYT VEEAVESIGF
GCFHILLFVI MGSANIVEAM EIMLLAVVSP EIRCEWHLED WQVALVSTMV FFGFMVCGVL
CGYIADKYGR WKVVFGGFVW ASYFSFLTSF STSYGWFIFL RCMVGCGVAA TSQGFVLKTE
FIPAKYRAYL LPLASIFWMM GSILIIVLGM TVVPTMGWRW MIRFSVIPSL VLIGLFMFIP
ESARFQVSAG NIQGAMSTLK RIAKMNNGVL PEGELREPEV TERGNAVTLI SSAFRRTSLL
LWYSWFVASF SYYGSVLSSS ELLEKNLLCV TDPDLEHQIK HIQEETLCYC IPFNSDDYQT
LLISCLGEVA LIPLNIILLN IVGRKYSMVI LLLLSAFFFM LVNICTTMLG FTILLFLLRS
VVSMNFNVVY IYTAEVYPTS VRSIGMGFCT SFSRIGGMIA PFIAQVLMSK SVILALSPFA
TACIICAIGV FFLPIETRGR ALLQDA