SWSN7_CAEEL
ID SWSN7_CAEEL Reviewed; 1244 AA.
AC Q09441;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 03-AUG-2022, entry version 133.
DE RecName: Full=SWI/SNF nucleosome remodeling complex component;
DE AltName: Full=ARID domain-containing protein C08B11.3;
GN ORFNames=C08B11.3;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
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DR EMBL; Z46676; CAA86663.1; -; Genomic_DNA.
DR PIR; T19068; T19068.
DR RefSeq; NP_495679.1; NM_063278.4.
DR AlphaFoldDB; Q09441; -.
DR BioGRID; 39618; 2.
DR ComplexPortal; CPX-1031; PBAF chromatin remodeling complex.
DR IntAct; Q09441; 1.
DR STRING; 6239.C08B11.3; -.
DR iPTMnet; Q09441; -.
DR EPD; Q09441; -.
DR PaxDb; Q09441; -.
DR PeptideAtlas; Q09441; -.
DR PRIDE; Q09441; -.
DR EnsemblMetazoa; C08B11.3a.1; C08B11.3a.1; WBGene00007433.
DR GeneID; 174286; -.
DR UCSC; C08B11.3; c. elegans.
DR CTD; 174286; -.
DR WormBase; C08B11.3; CE01473; WBGene00007433; swsn-7.
DR eggNOG; KOG2312; Eukaryota.
DR GeneTree; ENSGT00390000016138; -.
DR HOGENOM; CLU_006903_0_0_1; -.
DR InParanoid; Q09441; -.
DR OMA; NIACEID; -.
DR OrthoDB; 181026at2759; -.
DR PhylomeDB; Q09441; -.
DR Reactome; R-CEL-8939243; RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known.
DR PRO; PR:Q09441; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00007433; Expressed in embryo and 4 other tissues.
DR ExpressionAtlas; Q09441; baseline and differential.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006338; P:chromatin remodeling; IC:ComplexPortal.
DR GO; GO:2000781; P:positive regulation of double-strand break repair; IC:ComplexPortal.
DR GO; GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IC:ComplexPortal.
DR GO; GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IC:ComplexPortal.
DR GO; GO:2000819; P:regulation of nucleotide-excision repair; IC:ComplexPortal.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.150.60; -; 1.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR003150; DNA-bd_RFX.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF01388; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; SSF46774; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS51526; RFX_DBD; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..1244
FT /note="SWI/SNF nucleosome remodeling complex component"
FT /id="PRO_0000200600"
FT DOMAIN 24..116
FT /note="ARID"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00355"
FT DNA_BIND 623..697
FT /note="RFX-type winged-helix"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00858"
FT REGION 486..534
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 556..583
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 597..619
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1134..1244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 486..523
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1140..1235
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1244 AA; 139117 MW; 50FB3E4C13F73E06 CRC64;
MESRKRKSEL EHYIDKLTDP PEKQRKMAEF YNSLRMFYKR RWNATLKLPH VQGVEVNLYR
LYDTVMALGG WQKVAASDKW SDIAEMFGCK DDILCGDHAI KIIYMRYLSK FEQVETIGDV
DDYVDNEMSR SRGRNATSFF ATNECPISNN RMVQEYQHRD ERGQIINEPD YARLTKSLIS
GLPNEIDFAM NVCMLLSHAG PKQLRICHAP TLLTLLVAHT GVYDEDDETM ADMGKEWKRT
TKHNFRDFWA SSGVPLDMLM TFLDREIEAE YIDEDDQFFT GVSETFNVKD SRCWRLNQVT
TIIRNLSFEP ANRVTIVKTW PVMKFLIMCA SCKWSPLYVA ALDALSNLAT DIDLTDKTLV
YISQHAILRI ITDGIFSLDK FKLVRSLEIL TGLCGFEGNE AIICDWLNSA TIAHIFEVVG
VKDIMMCVYT LECLYQISEM GDTACDLISE SPKAIQQLVS MATLEAVSFG PAGLAGMKVV
EYQPSFTQGS NQQQNPHHSQ GGHQLGHSNV RMGGLNHNQH HQQIGPPGAP GAAPMTVRQV
IQNNLALQQV QRENLNREQY STQSSQPHPP HTNVPPSPSI LAHHSSGLVQ QNGMKFDRRT
GNLPVRPIAP STNSGESQLE QLTEKWIRQN CVFEPAMSTP RGELYAAYVD DLRNLYHSMS
GSLAMFSGVM KNLYPDVNFR MAQNGIMIVA QGIRLIRPHR LAPAASQSAS ESHPLMKKML
TSEPKEENGV LINGHAVQES GAERIIKTEP IRTDEPSVLI ESQEQSVPKK QNDINGEETD
EVELNSKIVT PEKKSITNGT VEVCQEPIQA SKLFDENYAN QIEGSEVSIE IREQFVNDTD
NVKLESEKIN GIICNGNSKV KKESMASRAA HIVAVAAACN GDLERMNVVS NGNDIEKEIE
KETEKVEEET NEEKNKEVVE TEVVDDAQES EKRKCVPPSS NPTDYMCDWD CCSIYYASPS
HVLKHLSEEH VAEELRLLCR WNGCADPTPR NRWSLITHIQ DSHCNEAQLK AASQKRKEGG
GIAPVRGAPR AEVISRDINN HPGYAKNAAF DAIRRHAFNF LSRELTDEAE GPVTKSIRLT
SCLILRNLAR YSAEGRQKLR RHESHICWLA LSRLESAHAL SQLLSELHQA PAAEEEQQKM
LSEVPSSASL SSMAGSSSQL PTVPDSPTSS VASAPMKEST SVSNKPTVHI NRMLNFSSLN
EKTPTSPQFT AGSSPHRHQP IQQHIPSQPS PLVQTTPVRA GAGI