ABITM_XENTR
ID ABITM_XENTR Reviewed; 183 AA.
AC Q28G67; Q6DIQ7;
DT 26-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Protein Abitram {ECO:0000305};
DE AltName: Full=Actin-binding transcription modulator;
DE AltName: Full=Protein Simiate;
GN Name=abitram; Synonyms=fam206a; ORFNames=TGas009a04.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC TISSUE=Gastrula;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May regulate actin polymerization, filopodia dynamics and
CC arborization of neurons. {ECO:0000250|UniProtKB:Q80ZQ9}.
CC -!- SUBCELLULAR LOCATION: Nucleus speckle {ECO:0000250|UniProtKB:Q80ZQ9}.
CC Cell projection, lamellipodium {ECO:0000250|UniProtKB:Q80ZQ9}. Nucleus
CC {ECO:0000250|UniProtKB:Q80ZQ9}. Cell projection, growth cone
CC {ECO:0000250|UniProtKB:Q80ZQ9}. Cell projection, dendrite
CC {ECO:0000250|UniProtKB:Q80ZQ9}. Note=Localizes to somata and dendrites
CC in cortical neurons. {ECO:0000250|UniProtKB:Q80ZQ9}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q28G67-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q28G67-2; Sequence=VSP_026315;
CC -!- SIMILARITY: Belongs to the ABITRAM family. {ECO:0000305}.
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DR EMBL; CR761531; CAJ82750.1; -; mRNA.
DR EMBL; BC075478; AAH75478.1; -; mRNA.
DR RefSeq; NP_001004966.1; NM_001004966.1. [Q28G67-2]
DR RefSeq; XP_012819979.1; XM_012964525.2. [Q28G67-2]
DR RefSeq; XP_012819980.1; XM_012964526.2. [Q28G67-1]
DR RefSeq; XP_012819981.1; XM_012964527.2. [Q28G67-1]
DR AlphaFoldDB; Q28G67; -.
DR SMR; Q28G67; -.
DR GeneID; 448390; -.
DR KEGG; xtr:448390; -.
DR CTD; 54942; -.
DR Xenbase; XB-GENE-6458491; abitram.
DR InParanoid; Q28G67; -.
DR OMA; CCMIGKL; -.
DR OrthoDB; 1277002at2759; -.
DR TreeFam; TF313930; -.
DR Proteomes; UP000008143; Chromosome 6.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000027667; Expressed in ovary and 16 other tissues.
DR GO; GO:0030425; C:dendrite; IBA:GO_Central.
DR GO; GO:0032433; C:filopodium tip; ISS:UniProtKB.
DR GO; GO:0030426; C:growth cone; ISS:UniProtKB.
DR GO; GO:0030027; C:lamellipodium; ISS:UniProtKB.
DR GO; GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0051015; F:actin filament binding; IBA:GO_Central.
DR GO; GO:0003785; F:actin monomer binding; IBA:GO_Central.
DR GO; GO:0048813; P:dendrite morphogenesis; ISS:UniProtKB.
DR GO; GO:0030833; P:regulation of actin filament polymerization; ISS:UniProtKB.
DR GO; GO:0051489; P:regulation of filopodium assembly; ISS:UniProtKB.
DR InterPro; IPR039169; Abitram.
DR InterPro; IPR033753; GCV_H/Fam206.
DR InterPro; IPR011053; Single_hybrid_motif.
DR PANTHER; PTHR13651; PTHR13651; 1.
DR Pfam; PF01597; GCV_H; 1.
DR SUPFAM; SSF51230; SSF51230; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cell projection; Nucleus; Reference proteome.
FT CHAIN 1..183
FT /note="Protein Abitram"
FT /id="PRO_0000291934"
FT VAR_SEQ 86
FT /note="R -> RGRPFIFQQDNARPHSASITTSWLRRRRIRVLKWPVCSPDLSPIENI
FT WHIIQRK (in isoform 2)"
FT /evidence="ECO:0000303|Ref.2"
FT /id="VSP_026315"
SQ SEQUENCE 183 AA; 20585 MW; 14D623534B8D790C CRC64;
MAEECNKLLE FPSVVDRYFK RWYKSDVKGK PCEDHCILQH SNRICIITLA ECHPLLQNGK
TIKTISYQIS ANCSRLQNKV SGKSKRGAQF LTEHAPLCRI SSTDGEEYTI YSCIRGRLLE
VNENILQNPE LLKEKPSTEG YIAVVLPKFE ESKTVTEGLL SQQEYEEILL SRAAVGSGTV
SAV