SYCN_HUMAN
ID SYCN_HUMAN Reviewed; 134 AA.
AC Q0VAF6;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Syncollin;
DE AltName: Full=Insulin synthesis-associated protein 1;
DE Flags: Precursor;
GN Name=SYCN; Synonyms=INSSA1, SYL;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Functions in exocytosis in pancreatic acinar cells regulating
CC the fusion of zymogen granules with each other. May have a pore-forming
CC activity on membranes and regulate exocytosis in other exocrine tissues
CC (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Monomer and homooligomer; most probably hexameric. Interacts
CC with GP2 (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Zymogen granule membrane
CC {ECO:0000250|UniProtKB:O35775}; Peripheral membrane protein
CC {ECO:0000250|UniProtKB:O35775}; Lumenal side
CC {ECO:0000250|UniProtKB:O35775}. Zymogen granule lumen
CC {ECO:0000250|UniProtKB:O35775}. Note=Associated in a cholesterol-
CC dependent manner with lipid rafts of zymogen granule membranes.
CC {ECO:0000250|UniProtKB:O35775}.
CC -!- PTM: Contains intrachain disulfide bonds. {ECO:0000250}.
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DR EMBL; BC121075; AAI21076.1; -; mRNA.
DR EMBL; BC121076; AAI21077.1; -; mRNA.
DR CCDS; CCDS46070.1; -.
DR RefSeq; NP_001073937.1; NM_001080468.3.
DR AlphaFoldDB; Q0VAF6; -.
DR SMR; Q0VAF6; -.
DR BioGRID; 131205; 8.
DR IntAct; Q0VAF6; 1.
DR STRING; 9606.ENSP00000325564; -.
DR iPTMnet; Q0VAF6; -.
DR PhosphoSitePlus; Q0VAF6; -.
DR BioMuta; SYCN; -.
DR DMDM; 121948659; -.
DR MassIVE; Q0VAF6; -.
DR PaxDb; Q0VAF6; -.
DR PeptideAtlas; Q0VAF6; -.
DR PRIDE; Q0VAF6; -.
DR ProteomicsDB; 58794; -.
DR TopDownProteomics; Q0VAF6; -.
DR Antibodypedia; 30273; 78 antibodies from 16 providers.
DR DNASU; 342898; -.
DR Ensembl; ENST00000318438.7; ENSP00000325564.6; ENSG00000179751.7.
DR GeneID; 342898; -.
DR KEGG; hsa:342898; -.
DR MANE-Select; ENST00000318438.7; ENSP00000325564.6; NM_001080468.4; NP_001073937.1.
DR UCSC; uc002okr.3; human.
DR CTD; 342898; -.
DR DisGeNET; 342898; -.
DR GeneCards; SYCN; -.
DR HGNC; HGNC:18442; SYCN.
DR HPA; ENSG00000179751; Tissue enriched (pancreas).
DR neXtProt; NX_Q0VAF6; -.
DR OpenTargets; ENSG00000179751; -.
DR PharmGKB; PA142670850; -.
DR VEuPathDB; HostDB:ENSG00000179751; -.
DR eggNOG; ENOG502S3UP; Eukaryota.
DR GeneTree; ENSGT00390000014835; -.
DR HOGENOM; CLU_1890586_0_0_1; -.
DR InParanoid; Q0VAF6; -.
DR OMA; PYLPSNW; -.
DR OrthoDB; 1433772at2759; -.
DR PhylomeDB; Q0VAF6; -.
DR TreeFam; TF338021; -.
DR PathwayCommons; Q0VAF6; -.
DR SignaLink; Q0VAF6; -.
DR BioGRID-ORCS; 342898; 12 hits in 1071 CRISPR screens.
DR GenomeRNAi; 342898; -.
DR Pharos; Q0VAF6; Tbio.
DR PRO; PR:Q0VAF6; -.
DR Proteomes; UP000005640; Chromosome 19.
DR RNAct; Q0VAF6; protein.
DR Bgee; ENSG00000179751; Expressed in body of pancreas and 85 other tissues.
DR Genevisible; Q0VAF6; HS.
DR GO; GO:0030667; C:secretory granule membrane; IBA:GO_Central.
DR GO; GO:0006887; P:exocytosis; IEA:UniProtKB-KW.
DR InterPro; IPR028137; Syncollin.
DR PANTHER; PTHR17503; PTHR17503; 1.
DR Pfam; PF15138; Syncollin; 1.
PE 2: Evidence at transcript level;
KW Cytoplasmic vesicle; Disulfide bond; Exocytosis; Membrane;
KW Reference proteome; Signal.
FT SIGNAL 1..21
FT /evidence="ECO:0000250"
FT CHAIN 22..134
FT /note="Syncollin"
FT /evidence="ECO:0000250"
FT /id="PRO_0000295276"
FT VARIANT 111
FT /note="L -> M (in dbSNP:rs2082416)"
FT /id="VAR_033284"
SQ SEQUENCE 134 AA; 14405 MW; 1928D95BA3EC4274 CRC64;
MSPLRPLLLA LALASVPCAQ GACPASADLK HSDGTRTCAK LYDKSDPYYE NCCGGAELSL
ESGADLPYLP SNWANTASSL VVAPRCELTV WSRQGKAGKT HKFSAGTYPR LEEYRRGILG
DWSNAISALY CRCS