SYC_AZOBR
ID SYC_AZOBR Reviewed; 448 AA.
AC O07045;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 15-JUL-1998, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Cysteine--tRNA ligase;
DE EC=6.1.1.16;
DE AltName: Full=Cysteinyl-tRNA synthetase;
DE Short=CysRS;
GN Name=cysS;
OS Azospirillum brasilense.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC Azospirillaceae; Azospirillum.
OX NCBI_TaxID=192;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 29145 / DSM 1690 / IMET 11303 / Sp7;
RX PubMed=9608743; DOI=10.1007/s002849900317;
RA Zimmer W., Wesche M., Timmermans L.;
RT "Identification and isolation of the indole-3-pyruvate decarboxylase gene
RT from Azospirillum brasilense Sp7: sequencing and functional analysis of the
RT gene locus.";
RL Curr. Microbiol. 36:327-331(1998).
RN [2]
RP IDENTIFICATION OF PROBABLE FRAMESHIFT.
RA Bairoch A.;
RL Unpublished observations (APR-1998).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-
CC cysteinyl-tRNA(Cys); Xref=Rhea:RHEA:17773, Rhea:RHEA-COMP:9661,
CC Rhea:RHEA-COMP:9679, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:35235, ChEBI:CHEBI:78442, ChEBI:CHEBI:78517,
CC ChEBI:CHEBI:456215; EC=6.1.1.16;
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000250};
CC -!- SUBUNIT: Monomer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC {ECO:0000305}.
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DR EMBL; X99587; CAA67901.1; ALT_FRAME; Genomic_DNA.
DR AlphaFoldDB; O07045; -.
DR SMR; O07045; -.
DR PRIDE; O07045; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004817; F:cysteine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006423; P:cysteinyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.620; -; 1.
DR HAMAP; MF_00041; Cys_tRNA_synth; 1.
DR InterPro; IPR015803; Cys-tRNA-ligase.
DR InterPro; IPR015273; Cys-tRNA-synt_Ia_DALR.
DR InterPro; IPR024909; Cys-tRNA/MSH_ligase.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR032678; tRNA-synt_1_cat_dom.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR PANTHER; PTHR10890; PTHR10890; 2.
DR Pfam; PF09190; DALR_2; 1.
DR Pfam; PF01406; tRNA-synt_1e; 1.
DR PRINTS; PR00983; TRNASYNTHCYS.
DR SMART; SM00840; DALR_2; 1.
DR SUPFAM; SSF47323; SSF47323; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase; Metal-binding;
KW Nucleotide-binding; Protein biosynthesis; Zinc.
FT CHAIN 1..448
FT /note="Cysteine--tRNA ligase"
FT /id="PRO_0000159341"
FT REGION 79..106
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 31..41
FT /note="'HIGH' region"
FT MOTIF 265..269
FT /note="'KMSKS' region"
FT COMPBIAS 79..95
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 29
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 206
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 235
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 268
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
FT CONFLICT 246..276
FT /note="EPLARYWVHQRLRDRRGARRMSKSLGNLLHR -> SRWPATGSTNGFVTVEG
FT REGCPSRWATFFTG (in Ref. 1; CAA67901)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 448 AA; 49574 MW; 45203E2255D5E1D1 CRC64;
MPLDLYNTLT RRKERFEPMT PDRVGMYVCG PTVYDTAHIG NARPVVFDLL FRLLRRLYPA
VTYVRNITAS DDKIIDRRAT TGADRGADQA HRGPLPRRHG PLNAAPTIEP RATHHISHMV
ALIGLLIEPA TPTPRKGTCC SPCRRWRSTG QLSRRSLDEM IAGARVEVAP YKRDSSDFVL
WKPSTDGQPG WDSPWGRGRP GWHIECSAMA KEHLGVTFDI HGGGLDLILP DHENEIAQSR
CAHAGEPLAR YWVHQRLRDR RGARRMSKSL GNLLHRGTSC WTEFPGGGHP LGVRPYRSRG
LPEAEESKAT LDRWYQALRG DPAPAQAELP FDVLAALEDD LNSPLAISHL HELASAVNKA
TGEAEKAAAK GRCRSAERWA APETRSVVPL GAEGAAALSD ADIQQRIEDR SAARKAKNYA
EADRIRKELA DLGIVLEDGP QGTTWKRA