SYDP_PSEA6
ID SYDP_PSEA6 Reviewed; 186 AA.
AC Q15QZ0;
DT 21-AUG-2007, integrated into UniProtKB/Swiss-Prot.
DT 25-JUL-2006, sequence version 1.
DT 25-MAY-2022, entry version 94.
DE RecName: Full=Protein Syd {ECO:0000255|HAMAP-Rule:MF_01104};
GN Name=syd {ECO:0000255|HAMAP-Rule:MF_01104}; OrderedLocusNames=Patl_3192;
OS Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Pseudoalteromonadaceae; Pseudoalteromonas.
OX NCBI_TaxID=342610;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=T6c / ATCC BAA-1087;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C.,
RA Bartlett D., Higgins B.P., Richardson P.;
RT "Complete sequence of Pseudoalteromonas atlantica T6c.";
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Interacts with the SecY protein in vivo. May bind
CC preferentially to an uncomplexed state of SecY, thus functioning either
CC as a chelating agent for excess SecY in the cell or as a regulatory
CC factor that negatively controls the translocase function.
CC {ECO:0000255|HAMAP-Rule:MF_01104}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-
CC Rule:MF_01104}; Peripheral membrane protein {ECO:0000255|HAMAP-
CC Rule:MF_01104}; Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_01104}.
CC Note=Loosely associated with the cytoplasmic side of the inner
CC membrane, probably via SecY. {ECO:0000255|HAMAP-Rule:MF_01104}.
CC -!- SIMILARITY: Belongs to the Syd family. {ECO:0000255|HAMAP-
CC Rule:MF_01104}.
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DR EMBL; CP000388; ABG41698.1; -; Genomic_DNA.
DR RefSeq; WP_011575928.1; NC_008228.1.
DR AlphaFoldDB; Q15QZ0; -.
DR SMR; Q15QZ0; -.
DR STRING; 342610.Patl_3192; -.
DR EnsemblBacteria; ABG41698; ABG41698; Patl_3192.
DR KEGG; pat:Patl_3192; -.
DR eggNOG; ENOG502ZCMR; Bacteria.
DR HOGENOM; CLU_121866_0_0_6; -.
DR OMA; GIPSPCI; -.
DR OrthoDB; 1287912at2; -.
DR Proteomes; UP000001981; Chromosome.
DR GO; GO:0009898; C:cytoplasmic side of plasma membrane; IEA:InterPro.
DR CDD; cd16323; Syd; 1.
DR Gene3D; 3.40.1580.20; -; 1.
DR HAMAP; MF_01104; Syd; 1.
DR InterPro; IPR009948; Syd.
DR InterPro; IPR038228; Syd_sf.
DR Pfam; PF07348; Syd; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome.
FT CHAIN 1..186
FT /note="Protein Syd"
FT /id="PRO_0000298254"
SQ SEQUENCE 186 AA; 21179 MW; 0C6C665FCED6BA91 CRC64;
MTSTVNQSLD DFMGRFAAFV KEHAEAGAIE YDEDWPSPCY ATDVTPESGT SIPWKPVLRE
QTSEFKDLSE ALELTLHPDV AQFYSRYWSD NIVAQHPSGK LQILQAWNEE DFERLQQNIV
GHILMKRRLR QPETIFIALT DEDDFVLSVD NQTGAVMLEQ VGLQPKEQIS PDLATFLDEI
EPTTTD