SYDP_SHEDO
ID SYDP_SHEDO Reviewed; 218 AA.
AC Q12P27;
DT 21-AUG-2007, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 25-MAY-2022, entry version 74.
DE RecName: Full=Protein Syd {ECO:0000255|HAMAP-Rule:MF_01104};
GN Name=syd {ECO:0000255|HAMAP-Rule:MF_01104}; OrderedLocusNames=Sden_1514;
OS Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318161;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OS217 / ATCC BAA-1090 / DSM 15013;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.;
RT "Complete sequence of Shewanella denitrificans OS217.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Interacts with the SecY protein in vivo. May bind
CC preferentially to an uncomplexed state of SecY, thus functioning either
CC as a chelating agent for excess SecY in the cell or as a regulatory
CC factor that negatively controls the translocase function.
CC {ECO:0000255|HAMAP-Rule:MF_01104}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-
CC Rule:MF_01104}; Peripheral membrane protein {ECO:0000255|HAMAP-
CC Rule:MF_01104}; Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_01104}.
CC Note=Loosely associated with the cytoplasmic side of the inner
CC membrane, probably via SecY. {ECO:0000255|HAMAP-Rule:MF_01104}.
CC -!- SIMILARITY: Belongs to the Syd family. {ECO:0000255|HAMAP-
CC Rule:MF_01104}.
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DR EMBL; CP000302; ABE54799.1; -; Genomic_DNA.
DR RefSeq; WP_011495957.1; NC_007954.1.
DR AlphaFoldDB; Q12P27; -.
DR SMR; Q12P27; -.
DR STRING; 318161.Sden_1514; -.
DR EnsemblBacteria; ABE54799; ABE54799; Sden_1514.
DR KEGG; sdn:Sden_1514; -.
DR eggNOG; ENOG502ZCMR; Bacteria.
DR HOGENOM; CLU_121866_0_0_6; -.
DR OMA; GIPSPCI; -.
DR OrthoDB; 1287912at2; -.
DR Proteomes; UP000001982; Chromosome.
DR GO; GO:0009898; C:cytoplasmic side of plasma membrane; IEA:InterPro.
DR CDD; cd16323; Syd; 1.
DR Gene3D; 3.40.1580.20; -; 1.
DR HAMAP; MF_01104; Syd; 1.
DR InterPro; IPR009948; Syd.
DR InterPro; IPR038228; Syd_sf.
DR Pfam; PF07348; Syd; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome.
FT CHAIN 1..218
FT /note="Protein Syd"
FT /id="PRO_0000298258"
SQ SEQUENCE 218 AA; 24857 MW; FF450A975739936B CRC64;
MSCSSALEKF INSYLNSYQN ALSELPRYYP MGVASPCIAQ TFDEQSEDAV FWQPVKREPA
GDFDNVASAL AITLHQDINH FYASFFSAPL QFNSPWGEGE LLLAWSLEDF EYLQQNIIGH
LLMKQKLKQA PTWFIGVLSD GDTMITVEND TGAVWIEVPG EVPKQQLAPS IAEFITQLSP
RITPAIKPVQ EVDPQWQHPG IWQRMKLMWR DLTHRSRK