SYF2_DEBHA
ID SYF2_DEBHA Reviewed; 231 AA.
AC Q6BVE0;
DT 13-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 25-MAY-2022, entry version 69.
DE RecName: Full=Pre-mRNA-splicing factor SYF2;
GN Name=SYF2; OrderedLocusNames=DEHA2C03366g;
OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990
OS / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Debaryomyces.
OX NCBI_TaxID=284592;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Involved in pre-mRNA splicing. {ECO:0000250}.
CC -!- SUBUNIT: Associated with the spliceosome. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SYF2 family. {ECO:0000305}.
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DR EMBL; CR382135; CAG85874.2; -; Genomic_DNA.
DR RefSeq; XP_457829.2; XM_457829.1.
DR AlphaFoldDB; Q6BVE0; -.
DR SMR; Q6BVE0; -.
DR STRING; 4959.XP_457829.2; -.
DR EnsemblFungi; CAG85874; CAG85874; DEHA2C03366g.
DR GeneID; 2900022; -.
DR KEGG; dha:DEHA2C03366g; -.
DR VEuPathDB; FungiDB:DEHA2C03366g; -.
DR eggNOG; KOG2609; Eukaryota.
DR HOGENOM; CLU_051065_4_0_1; -.
DR InParanoid; Q6BVE0; -.
DR OMA; AYSHDHK; -.
DR OrthoDB; 1565402at2759; -.
DR Proteomes; UP000000599; Chromosome C.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR013260; mRNA_splic_SYF2.
DR PANTHER; PTHR13264; PTHR13264; 1.
DR Pfam; PF08231; SYF2; 1.
PE 3: Inferred from homology;
KW Coiled coil; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Spliceosome.
FT CHAIN 1..231
FT /note="Pre-mRNA-splicing factor SYF2"
FT /id="PRO_0000072374"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 144..231
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 30..89
FT /evidence="ECO:0000255"
FT COMPBIAS 154..182
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 188..212
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 231 AA; 27278 MW; B779FDCD6F915A6A CRC64;
MSSEESGEVG VPKNGNQDDD SGSTRVSVSD RLAKLQRLKR KKQESEKLNK QELFQDYKQQ
KLKSIEYKKI EQKKLNAELE QEKLDSIEKG EDFERKQNWD WTIEDCEKWE KKTKQKGRNQ
KSGFQNFNKM AEQAYNKELS NLKVDKETYD QQKNAINKNK SGNQSQMSKI LPVSSKPSAA
DTNRLVRNIE EANNRRMKRR RNKDDENDVN SYINDKNKQF NLKLNRQYDE S
