SYFB_PORPU
ID SYFB_PORPU Reviewed; 720 AA.
AC P51346;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Phenylalanine--tRNA ligase beta subunit, chloroplastic;
DE EC=6.1.1.20;
DE AltName: Full=Phenylalanyl-tRNA synthetase beta subunit;
DE Short=PheRS;
GN Name=pheT;
OS Porphyra purpurea (Red seaweed) (Ulva purpurea).
OG Plastid; Chloroplast.
OC Eukaryota; Rhodophyta; Bangiophyceae; Bangiales; Bangiaceae; Porphyra.
OX NCBI_TaxID=2787;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Avonport;
RA Reith M.E., Munholland J.;
RT "Complete nucleotide sequence of the Porphyra purpurea chloroplast
RT genome.";
RL Plant Mol. Biol. Rep. 13:333-335(1995).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + H(+) +
CC L-phenylalanyl-tRNA(Phe); Xref=Rhea:RHEA:19413, Rhea:RHEA-COMP:9668,
CC Rhea:RHEA-COMP:9699, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:58095, ChEBI:CHEBI:78442,
CC ChEBI:CHEBI:78531, ChEBI:CHEBI:456215; EC=6.1.1.20;
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Note=Binds 2 magnesium ions per tetramer. {ECO:0000250};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the phenylalanyl-tRNA synthetase beta subunit
CC family. Type 1 subfamily. {ECO:0000305}.
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DR EMBL; U38804; AAC08232.1; -; Genomic_DNA.
DR PIR; S73267; S73267.
DR RefSeq; NP_053956.1; NC_000925.1.
DR AlphaFoldDB; P51346; -.
DR SMR; P51346; -.
DR PRIDE; P51346; -.
DR GeneID; 810045; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000287; F:magnesium ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004826; F:phenylalanine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006432; P:phenylalanyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd00769; PheRS_beta_core; 1.
DR Gene3D; 3.30.70.380; -; 1.
DR Gene3D; 3.30.930.10; -; 1.
DR Gene3D; 3.50.40.10; -; 1.
DR HAMAP; MF_00283; Phe_tRNA_synth_beta1; 1.
DR InterPro; IPR045864; aa-tRNA-synth_II/BPL/LPL.
DR InterPro; IPR005146; B3/B4_tRNA-bd.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR005121; Fdx_antiC-bd.
DR InterPro; IPR036690; Fdx_antiC-bd_sf.
DR InterPro; IPR045060; Phe-tRNA-ligase_IIc_bsu.
DR InterPro; IPR004532; Phe-tRNA-ligase_IIc_bsu_bact.
DR InterPro; IPR020825; Phe-tRNA_synthase-like_B3/B4.
DR InterPro; IPR041616; PheRS_beta_core.
DR InterPro; IPR005147; tRNA_synthase_B5-dom.
DR PANTHER; PTHR10947; PTHR10947; 1.
DR Pfam; PF03483; B3_4; 1.
DR Pfam; PF03484; B5; 1.
DR Pfam; PF03147; FDX-ACB; 1.
DR Pfam; PF17759; tRNA_synthFbeta; 1.
DR SMART; SM00873; B3_4; 1.
DR SMART; SM00874; B5; 1.
DR SMART; SM00896; FDX-ACB; 1.
DR SUPFAM; SSF46955; SSF46955; 2.
DR SUPFAM; SSF54991; SSF54991; 1.
DR SUPFAM; SSF55681; SSF55681; 1.
DR TIGRFAMs; TIGR00472; pheT_bact; 1.
DR PROSITE; PS51483; B5; 1.
DR PROSITE; PS51447; FDX_ACB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Chloroplast; Ligase; Magnesium;
KW Metal-binding; Nucleotide-binding; Plastid; Protein biosynthesis.
FT CHAIN 1..720
FT /note="Phenylalanine--tRNA ligase beta subunit,
FT chloroplastic"
FT /id="PRO_0000126995"
FT DOMAIN 319..404
FT /note="B5"
FT DOMAIN 626..719
FT /note="FDX-ACB"
FT BINDING 382
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_note="shared with alpha subunit"
FT /evidence="ECO:0000250"
FT BINDING 388
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_note="shared with alpha subunit"
FT /evidence="ECO:0000250"
FT BINDING 391
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_note="shared with alpha subunit"
FT /evidence="ECO:0000250"
FT BINDING 392
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_note="shared with alpha subunit"
FT /evidence="ECO:0000250"
SQ SEQUENCE 720 AA; 82593 MW; 495E49947117F62A CRC64;
MNFLNKSLIR DSVVLQNRWK IIMKVSLNWL KELAKIEIID AHSLANKLTQ AGFEVEDVEM
VNIDGHKDYI LDVTSTANRS DVLSMIGLSR EVSALTQADI VKTADIPSAG LFDNISTIIS
DDSLLNCSYY VSAIMDNIVI QDSPKWLKNR LYSCGFISQN LIIDISNYIM LKWGQPINII
DLKKIADTNT ESYIEITSNF CSSKQKSVKL DNKDIALSRD VLITQINNNI TSIAGIGINQ
EFHVDQNTKL IFIEAAIFKE AVVRKSSRSI GIRTESSIRQ ERGLNIDNGR SAYRETLSLL
IELTHGKVKA TFLKKETENS TLNIDISLKK IQDVLGPIKD NHTVRFLSFD EIENTLKSLQ
FKITKKDVKK FNVIIPSYRK YDVFREIDIV EEIARVYGYN QFQSKIPKIQ FTKHPSSRRN
FIDQIRNILR NLGLTELVHY SLVKSKGEIN LKNPLIKDYS TLRSSLLEGL INASAYNIKQ
SNQTVDGFEI GTVFNLKRNK IIETTKLAII LGGSLDIRSE WSEPAHSLNW YEAKGIIENF
FRKLNKSIQW VKRESSNDQI NFIQNNKSAT LTYNNDNIGL FGELNELTSS QFGFNTELFV
LEIDLDILQY SDPEINYLSY RIQPYSKYPC ITRDLCIVIP KKMQINSLFQ LLNQFNDNDL
ENMTLFDQYS NKLLGNGKKS IGLRFTYRSD HKTLTNLEID NKQNELQKNI IKKLNLEIRK