SYGB_CITBB
ID SYGB_CITBB Reviewed; 687 AA.
AC B5ED84;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 14-OCT-2008, sequence version 1.
DT 25-MAY-2022, entry version 64.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=Gbem_0642;
OS Citrifermentans bemidjiense (strain ATCC BAA-1014 / DSM 16622 / JCM 12645 /
OS Bem) (Geobacter bemidjiensis).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;
OC Geobacteraceae; Citrifermentans.
OX NCBI_TaxID=404380;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1014 / DSM 16622 / JCM 12645 / Bem;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C.,
RA Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Lykidis A., Lovley D., Richardson P.;
RT "Complete sequence of Geobacter bemidjiensis BEM.";
RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; CP001124; ACH37670.1; -; Genomic_DNA.
DR RefSeq; WP_012529078.1; NC_011146.1.
DR AlphaFoldDB; B5ED84; -.
DR SMR; B5ED84; -.
DR STRING; 404380.Gbem_0642; -.
DR EnsemblBacteria; ACH37670; ACH37670; Gbem_0642.
DR KEGG; gbm:Gbem_0642; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_7; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000008825; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..687
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000101281"
SQ SEQUENCE 687 AA; 75710 MW; F46093145AC0006B CRC64;
MAKDLFLEIG CEEIPAGFVP KAMADMELLI KKEFDSARIE YGEIVTLGTP RRLVLAVKGV
AERQPDAELT AMGPAKSHAY DADGNPTKAA QGFARGQGID VSQLKLVTTE KGEYLAAVKS
EIGRATAELL PELLPRLIGN IPFKKSMRWA DFDVRFARPI HWIVALFDGK VVPFSFGNID
SGSASRGHRF MANTSFPVRD LAHYLEECER HFVIPDPNKR KEIIRAEIER VAKQAKGNVL
PDEALLEQVS YLVEYPSAVH GTFSPDFLVV PREVLITSMR EHQRYFSLVD DEGKLLPGFI
TINNTITEDP QVVVKGNERV LRARLSDARF FFDEDHKVRL EARVESLKSV VYQAKLGTSY
EKMERFRELG KRLAQRLNPA VTKEVERAAT LCKADLVSGM VGEFPEVQGI MGREYALHDG
EEKAVANAIA EHYLPTQAGG ELPASDIGAF VSLADKMDTI CGCFSVGLIP TGSADPYALR
RSALGIINII LDKGYREPLS DFVKASLDLL SAKATRPLAE VQKDVLDFFR GRFVNLMADR
FPSDAVEAVV SVSFDDLVEA AAKIEALAGF RNRDDFGPLA VAFKRVCNIV KDGVDTPVST
ELFQDAAEGE LHQALTQVSG KVAAALKKAD YLAALTEIAT LKPAVDLFFE KVMVMAEDER
VRQNRLALLT GIARLFGSLA DFSRLSP