SYGB_CLOD6
ID SYGB_CLOD6 Reviewed; 688 AA.
AC Q182B8;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=CD630_24320;
OS Clostridioides difficile (strain 630) (Peptoclostridium difficile).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptostreptococcaceae;
OC Clostridioides.
OX NCBI_TaxID=272563;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=630;
RX PubMed=16804543; DOI=10.1038/ng1830;
RA Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N.,
RA Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H.,
RA Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N.,
RA Brooks K., Chillingworth T., Cronin A., Davis P., Dowd L., Fraser A.,
RA Feltwell T., Hance Z., Holroyd S., Jagels K., Moule S., Mungall K.,
RA Price C., Rabbinowitsch E., Sharp S., Simmonds M., Stevens K., Unwin L.,
RA Whithead S., Dupuy B., Dougan G., Barrell B., Parkhill J.;
RT "The multidrug-resistant human pathogen Clostridium difficile has a highly
RT mobile, mosaic genome.";
RL Nat. Genet. 38:779-786(2006).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; AM180355; CAJ69318.1; -; Genomic_DNA.
DR RefSeq; WP_011861551.1; NZ_CP010905.2.
DR RefSeq; YP_001088945.1; NC_009089.1.
DR AlphaFoldDB; Q182B8; -.
DR SMR; Q182B8; -.
DR STRING; 272563.CD630_24320; -.
DR EnsemblBacteria; CAJ69318; CAJ69318; CD630_24320.
DR KEGG; cdf:CD630_24320; -.
DR KEGG; pdc:CDIF630_02675; -.
DR PATRIC; fig|272563.120.peg.2567; -.
DR eggNOG; COG0751; Bacteria.
DR OMA; LPIPKRM; -.
DR PhylomeDB; Q182B8; -.
DR BioCyc; PDIF272563:G12WB-2584-MON; -.
DR Proteomes; UP000001978; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..688
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000101268"
SQ SEQUENCE 688 AA; 78470 MW; 2346E232152665A6 CRC64;
MKNYLLFEIG VEEMPSRFVG STLEQLKNNL SKLFDENRIA FDKINAYGTP RRLTLVVEGL
SDRQNDLEEE IKGPAKKIAV DAENNLTKPA LGFIKSKGLS ESDIYFKQVG KEEYIFATIK
QDGKETSEVL KDILPETIKS VVFPKAMRWG GKNLKFARPI RWIVALLNDK VLEFDLEGII
SSNVTKGHRF LGESTIEVDS IEDYFEKLEK NYIVLDQNKR KEMIRKQCIE VANSLGGEVE
FDEDLLEEVT YLVEYPTAFY GEFDVDYIKL PKEVVITPMK QHQRYFPVLK EGKLLPNFIA
VRNGDSYRID NVKAGNEKVL EARLADALFF YREDTKRNLE SYIEKLKTVV FQVKLGTIYD
KTLRLEKLSA DILDSLGLVD EKTDTIRAAK LSKADLVTGM VGEFDELQGF MGKEYAKVGG
ENDVVSEAIF EHYLPRFAGD ILPKTNAGVA LSIADKLDSI AGFFAIGIQP TGSQDPYALR
RQALGILSIL MDRKVAVDIK VLIEHALDNY SELDFDKEEV VEQIMNFFNE RVKNLFKDLG
IRYDVVDAVL SSDINDVSDM HMRALELNNW LEKDELVEML TAFNRVSTLA QKAESDKIDE
SLLKEDAEIK LYNEFKQVKI KVNELLKDKK YGIALDEFAS LRPVVDNLFD TVMVMDNDEA
IKNNRLALLK QVYDTMLEIC DLSKIVYK