SYGB_DESAH
ID SYGB_DESAH Reviewed; 689 AA.
AC C0QJ89;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-MAY-2009, sequence version 1.
DT 25-MAY-2022, entry version 66.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=HRM2_28130;
OS Desulforapulum autotrophicum (strain ATCC 43914 / DSM 3382 / VKM B-1955 /
OS HRM2) (Desulfobacterium autotrophicum).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales;
OC Desulfobacteraceae; Desulforapulum.
OX NCBI_TaxID=177437;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43914 / DSM 3382 / VKM B-1955 / HRM2;
RX PubMed=19187283; DOI=10.1111/j.1462-2920.2008.01825.x;
RA Strittmatter A.W., Liesegang H., Rabus R., Decker I., Amann J., Andres S.,
RA Henne A., Fricke W.F., Martinez-Arias R., Bartels D., Goesmann A.,
RA Krause L., Puehler A., Klenk H.P., Richter M., Schuler M., Gloeckner F.O.,
RA Meyerdierks A., Gottschalk G., Amann R.;
RT "Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate
RT reducer oxidizing organic carbon completely to carbon dioxide.";
RL Environ. Microbiol. 11:1038-1055(2009).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; CP001087; ACN15902.1; -; Genomic_DNA.
DR RefSeq; WP_015904665.1; NC_012108.1.
DR AlphaFoldDB; C0QJ89; -.
DR SMR; C0QJ89; -.
DR STRING; 177437.HRM2_28130; -.
DR EnsemblBacteria; ACN15902; ACN15902; HRM2_28130.
DR KEGG; dat:HRM2_28130; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_7; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000000442; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..689
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000204601"
SQ SEQUENCE 689 AA; 75662 MW; 25A55CE9DDDF28CE CRC64;
MNNLLIEIGA EEIPAGYILP ALTSFCDRVT AALTGARINH GKTAVFGTPR RLALMVEDVQ
ACQAPQKTTL MGPPQRIGFD NEGKPTLAGV KFAEKAGIVP EEIIITDNGK GPYLSAVIEE
SCLLTEAILE GVLPELIQAI PFPKSMHWGD LDVTFARPIV SLTALLGKTV LNFKIGNIAS
ASFVFGHSFM APERFELESA DAYLDTLRKA GVVADIGERR TILKESIKAA ADKACATIIE
DEELVDIVNN LVEYPYPVVG HFDEVFLELP DEVLITAMRE HQKYFALADT AGKLMPCFIA
VNNTRARDMD VVAKGHGKVI RARLADAQFF YHVDLESTLD DFVEKLKAVT FQASLGSMYE
KTGRLVVLVE FLAGLVNADQ ELQKKLMRAA RLSKADLVSQ MVIEFTKLQG IIGRVYAQKG
GEDPEVAMAI EEHYRPVYSG GDLPRTDTGK ILAIADKTDT LCGCFSANLI PTGASDPYAL
RRQSIGILQI MLEAGFDFSL RALVRRGVAQ YQTDPDKKNE ISTQILEFLK GRMTNMLVDQ
GFSREAVNAA LSVSFYNVPD AFLRIKALDI LRQEPDFEPL STAFKRVVNI LKKAGGDAKT
RVNVNLFNCD AEKALHQACG EVTERVDTCI KAGDYGAALK EISTLRPHVD RLFEDVMVMD
DDVALRINRM ALLSSVAALF RNIADFSQI